Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652547
Identifier: 148652547
GI number: 148652547
Start: 879585
End: 880634
Strand: Direct
Name: 148652547
Synonym: PsycPRwf_0738
Alternate gene names: NA
Gene position: 879585-880634 (Clockwise)
Preceding gene: 148652545
Following gene: 148652548
Centisome position: 29.53
GC content: 47.43
Gene sequence:
>1050_bases ATGGAAGAGTTAGCCACCTTGGCAGATTTGCCAGCCGATTATGTCACAGACATTAACAGTAAAAATTTGGTTCCACTTTG GCCAAGCCTACGTGATGTTCTTCCTCCTCTGAGTCCTAAACCTCGTACCAAACCCACGCTTTGGGCGTATAAAGATATTC GTGGACCACTTTTAAAGTCTGGTGAGTTAACACCGGTTGAAAAAGCGGAGCGTCGAGTATTGGTACTGGCTAACCCTGGG CTTGGACTTGACAATATGTCAGCAAGTCCAGTGATTTATCTGGGCATGCAGTTGCTACTGCCAGGTGAATGGGCACCTTC TCATCGTCACACCCCCAATGCCGTACGCTTAATTGTTGAAGGGGATGGGGCGTACACCACCATTGATGGGATAAAATGCC CCATGGAACATGGCGACTTGATTTTAACCCCCTCTGGTACTTGGCATGAACATGGTCACGATGGCGATGAGCCTGTCATT TGGTTAGATATTTTAGATTTGCCGCTGGTTTATTATAGCGAAGCTACCTATGTAGAGCCTATCGGTCGCCAACAAGTCGA GTCCACCTCCATCAACTCTCCCTATGTCAATGGGATCGTACCTGTCAAAAACTTTGTCCGTAATGATGCGGCATATCCCA TCTTACGTTATCGCTGGCGTGATGTTAAACATGCGCTGCACACGATAGCTGAGAATGAGCCAGACGTTGAAATCGTACAA GTAGCGTATACCAACCCTGAAAATGGTCAACCTGCTGAGCAGATTATCGGCTTTAGCTGTATCATGCTACGCCCCAATGA AACGGTTAAGCTTGTCAAGCGCTCGTGTGCCATGGCGTTTCATGTCATCGATGGTGATATGAAAATGACCATCAATAATG CAAATGACGTACAAGACTTTACCATGACACGCTCTGACACCAGTGTAGCCCCTTGTTTTGCCGAGGTCGACTTAACGAAC TTAAGCGACAAGCCTTGCTACGTCTTTGTGGCAGATGAAGCCCCATTCCAGCAAAAAATTGGGGTGTATTCGGAGCGTGA ACGGGGTTAG
Upstream 100 bases:
>100_bases TATTTTTAATAGAGTGAATTATTTTGATTGCATAGATGAAACAGATAGTGGGTGATACAGTATAAAAATAGTCAATCACT ATTTTTATGGAGTCTCCCTC
Downstream 100 bases:
>100_bases TCGTCTTTTGACCAACACATATTGACCAACACATTAAAAATAAAACGCTGATATCAAAAGCTCACGTTTGTTAACTAGGG GGCTATTTTACGCCCTATTA
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Gentisate 1 2-Dioxygenase Oxidoreductase; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Dioxygenase Oxidoreductase Protein; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Dioxygenase; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN LSDKPCYVFVADEAPFQQKIGVYSERERG
Sequences:
>Translated_349_residues MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN LSDKPCYVFVADEAPFQQKIGVYSERERG >Mature_349_residues MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN LSDKPCYVFVADEAPFQQKIGVYSERERG
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38927; Mature: 38927
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKS CCHHHHHHHCCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCC GELTPVEKAERRVLVLANPGLGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVE CCCCCHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEE GDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVIWLDILDLPLVYYSEATYVEP CCCCEEEECCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECC IGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ CCCHHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDF EEECCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCE TMTRSDTSVAPCFAEVDLTNLSDKPCYVFVADEAPFQQKIGVYSERERG EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCC >Mature Secondary Structure MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKS CCHHHHHHHCCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCC GELTPVEKAERRVLVLANPGLGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVE CCCCCHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEE GDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVIWLDILDLPLVYYSEATYVEP CCCCEEEECCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECC IGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ CCCHHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDF EEECCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCE TMTRSDTSVAPCFAEVDLTNLSDKPCYVFVADEAPFQQKIGVYSERERG EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA