Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652539
Identifier: 148652539
GI number: 148652539
Start: 872395
End: 873222
Strand: Direct
Name: 148652539
Synonym: PsycPRwf_0729
Alternate gene names: NA
Gene position: 872395-873222 (Clockwise)
Preceding gene: 148652538
Following gene: 148652540
Centisome position: 29.29
GC content: 34.9
Gene sequence:
>828_bases TTGTTAAAGAATATATTTCCCCCGAAAATCGTTGACGGCTATGCAAGTCCATGGCGTGATGGTGGGTATCAGCTCAAGGT TAACGAGCAGAGTGTCGGTAAGGATCGTTATGAAAAATATAAGCACAATGTAGCTCTTCAGAGTATATGGGATAAATGCT TGAAAAAGCAACAAGACTCATATAGTGAATATGAGGTGAAACAAAAGAGTCTTAAATCTGTTAAAACGTATATAAGCAAT TTCTATAAACAGTGTTTTGAAGGTGATCCATTATTTGCATTTGTATCGCAGAGCTACTGCTGTGTTAGATATCATCACTG GTATGCGGTATCAAAAGATTATCACTTAAAGTTATATCAGAGCCGTCAGGTCTTATCAACTAAGGCGTTTGATGAGTTTC AATCAATGGTGATTGATGACCTCAAAAATAATTTTAATAAAGAACGACGTTTTGAAGCGGCCTTTAATAGGTATGTGAAG TTTATTGATTTTATTAATAAAAATTACCTGCGTAAGCCTTTTTATTATGCATTACCTCAAATCAATAAACTAAACAAACG AAACGACCTTATTATTCCAGCTAACTGGATTGCCGACAATAAACACATTTATCAGATAGTTGAGTTGGTAATAGAATACT GGGGAAAGAGAAGACTAGATTCTGAGGAGGAAATAATAGCGAGCTTGTTGTTCTCAGGCATTTTTTTTGGAGGAATAAAT GACAAAACATGGCTGTTGTCGTGGCTAACTCAGTGTCTTAATAATAACTTACAGCCATTCATAGACCACACTTTGCAAAT TACTATTAGATATAGAAGCTTTAAGTGA
Upstream 100 bases:
>100_bases GCGATCAAAAGTGTTGGTTCTAATTTTGAGCAAATCGCTTTAGAACTTGGTTTGCAGGACTTTAGTGACATCATTTGTAA ACTCATAGAGGTACACCCTT
Downstream 100 bases:
>100_bases TGTATGCTGAAAAAAACGGACAAAAATATTTGGTAAACTAGAATCCTAAACAGGAGTTTACCATGAGTAAGAAAAGAGTA GAATACAGCGACACTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLKNIFPPKIVDGYASPWRDGGYQLKVNEQSVGKDRYEKYKHNVALQSIWDKCLKKQQDSYSEYEVKQKSLKSVKTYISN FYKQCFEGDPLFAFVSQSYCCVRYHHWYAVSKDYHLKLYQSRQVLSTKAFDEFQSMVIDDLKNNFNKERRFEAAFNRYVK FIDFINKNYLRKPFYYALPQINKLNKRNDLIIPANWIADNKHIYQIVELVIEYWGKRRLDSEEEIIASLLFSGIFFGGIN DKTWLLSWLTQCLNNNLQPFIDHTLQITIRYRSFK
Sequences:
>Translated_275_residues MLKNIFPPKIVDGYASPWRDGGYQLKVNEQSVGKDRYEKYKHNVALQSIWDKCLKKQQDSYSEYEVKQKSLKSVKTYISN FYKQCFEGDPLFAFVSQSYCCVRYHHWYAVSKDYHLKLYQSRQVLSTKAFDEFQSMVIDDLKNNFNKERRFEAAFNRYVK FIDFINKNYLRKPFYYALPQINKLNKRNDLIIPANWIADNKHIYQIVELVIEYWGKRRLDSEEEIIASLLFSGIFFGGIN DKTWLLSWLTQCLNNNLQPFIDHTLQITIRYRSFK >Mature_275_residues MLKNIFPPKIVDGYASPWRDGGYQLKVNEQSVGKDRYEKYKHNVALQSIWDKCLKKQQDSYSEYEVKQKSLKSVKTYISN FYKQCFEGDPLFAFVSQSYCCVRYHHWYAVSKDYHLKLYQSRQVLSTKAFDEFQSMVIDDLKNNFNKERRFEAAFNRYVK FIDFINKNYLRKPFYYALPQINKLNKRNDLIIPANWIADNKHIYQIVELVIEYWGKRRLDSEEEIIASLLFSGIFFGGIN DKTWLLSWLTQCLNNNLQPFIDHTLQITIRYRSFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33006; Mature: 33006
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNIFPPKIVDGYASPWRDGGYQLKVNEQSVGKDRYEKYKHNVALQSIWDKCLKKQQDS CCCCCCCCHHHCCCCCCCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC YSEYEVKQKSLKSVKTYISNFYKQCFEGDPLFAFVSQSYCCVRYHHWYAVSKDYHLKLYQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCEEEEEEEEEEECCCCEEEHHH SRQVLSTKAFDEFQSMVIDDLKNNFNKERRFEAAFNRYVKFIDFINKNYLRKPFYYALPQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC INKLNKRNDLIIPANWIADNKHIYQIVELVIEYWGKRRLDSEEEIIASLLFSGIFFGGIN HHHCCCCCCEEEECHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC DKTWLLSWLTQCLNNNLQPFIDHTLQITIRYRSFK CHHHHHHHHHHHHCCCCCHHHCCEEEEEEEEECCC >Mature Secondary Structure MLKNIFPPKIVDGYASPWRDGGYQLKVNEQSVGKDRYEKYKHNVALQSIWDKCLKKQQDS CCCCCCCCHHHCCCCCCCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC YSEYEVKQKSLKSVKTYISNFYKQCFEGDPLFAFVSQSYCCVRYHHWYAVSKDYHLKLYQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCEEEEEEEEEEECCCCEEEHHH SRQVLSTKAFDEFQSMVIDDLKNNFNKERRFEAAFNRYVKFIDFINKNYLRKPFYYALPQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC INKLNKRNDLIIPANWIADNKHIYQIVELVIEYWGKRRLDSEEEIIASLLFSGIFFGGIN HHHCCCCCCEEEECHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC DKTWLLSWLTQCLNNNLQPFIDHTLQITIRYRSFK CHHHHHHHHHHHHCCCCCHHHCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA