Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652538
Identifier: 148652538
GI number: 148652538
Start: 870006
End: 872429
Strand: Direct
Name: 148652538
Synonym: PsycPRwf_0728
Alternate gene names: NA
Gene position: 870006-872429 (Clockwise)
Preceding gene: 148652537
Following gene: 148652539
Centisome position: 29.2
GC content: 38.24
Gene sequence:
>2424_bases ATGAAAGATTCGGCCGAAGAGATGGTTATTGTGGATTTAGCTGACTTACAGAAAGCTCTAGAGCTTGCTACATCAGAGCT TGATACGGAGCTTGTTGAGGCTCTAAATGAGTTAATTATTGATCTGCATCGTGCCGTAACTTCTGAGATTAGTCTTAAAG AAGTCGATTTGAGTCGGTTAGCAGAAATTAATTTTTTTGATTACCAAATATCACGAAAGTGGTTTAAAGGTAAATCACTA GAGCATCAGCTTATTGCAATTTTGATCGATGCTACTAGCAAGGACACTAATAAATCTTTATGGATTGCAGTCGTTCTGTA TATCAGTTTGGTACTAAAAATTCATGGTAAAGACAAAGAGTCGGAGCGACTGATTAAACGCTTTAAAACAGCCTACTTTT ATAAGACACGTAACTACCAGTGGATTTGGAATGAGCTCCCAAACCTCGATAAAACTGAAGAAGTGACACACGCACTCATC TTGAATACCTTCGCATTAATGCTTGACAAGTTAAATGAAAATAAAGCGGAAGCTGAGGCAAATAGGGTTAGGGGAATAGT TGAAACAGAAGCAACAACAAAGTTTAGAGATAAAAAGCTCAATCAAATAAGCGAGATTAAGAAATACATAGAAGCGGCGT ATTACCCACACCGTAAAAGCCCAAAAAAGGCACCAAAGCCAAAGACGAAATCTAAAAGCACTAGCACTAACAAAAACGAA GGAGAGGGGCGAACTAAAAAGCTCAGACCGCCTACACTCTCAGATAATGTCGAAAGAACACCGGCTGCTACGTCCTTTAA TGACATAGACAGCCCGATTAGTAAGAGAGATTGGGCTGTATTTGATGCATTCTATGTACCAGACAGTACTATTGATTATG CTACTAAAGAAGAAGCTTTTGATGTCATGCCACCTAGGGTTGAGATTTACTGGCCAAAAACTCAAACACAAAACCGAGGA AGGAGAAGTTTTGAGTTAGACGCAGTCGATTTTAGTGTCAAGCAGCAACATATCAGCTTAAAAGAACTAGAGTTGCCATC AGACGTAAATATGCTTTCAACTACCTCTTGTAAACTTATATTTAATCAGTTGTCATCAGATTGGAAGAGTAATGATAAAA AAATGAGTCTGATTGCGGCAATCTTACTACTTTCAATGATTACAGCATGTCCAGTGGCTAGCTTGATTGAAAAAGGCTTT ATTGAAAAGTCAGGGTTATTCTATATAGGTAAACGTAAAGGTTATCTACAGTCGAAACTTGGGGTAACTACGATAGAGGA ATACAGTGACAATAATTTAAATAGCACAGACCTAATTAAAATACCTTTGCCCGTTAGTTTGCTAAAAGCAGCCATAGAAG CCTCTAAAAGCCAAATTAAAATAGAAGATATTGAAGCCTATGTAAAGAGGCTAAAAGAAAGCCTTAATATAGTGTACACA ACTATTAGTAGGATTGAATCAGCGCTACATTTTATTTTGAGGAGATTTGTCGAAGGTAGTAACTCACATATCGCTGATAT TCTTTGTCGGATCGATGCAAGTCAAGCAGCTGCTAAATATTATAGTAGCCATTCTCATCAAGAGTTAATAGGGCACTATA AAAAAGCATTGCAGTTTATGAATATACATAACTGTTTTGACCTTGATTATATTGACAGCCATTCAGAAGATTTTTTGACA GGATCAGGGTTTGCCTTGAAATTAGAGAGTGTTAGGCAGTTTTTTCAACGTCTCAGGAGTTGGGTAATAGAGAGTCAAGG CGAGAAGGAGCTGTTCAATCGATTCAGTGTTTTTTCATGGTATTGCTTCTGCATATTAACAGGGACTCGTCCAAATAATG GATTACCTAATGCAAAAGATTTAGACCTTCAAGTTGGTTGGTATCAAGTCGCTGACAAGCCTAATAAAGTGACACAAAAC CATAGATTAATACCACTCTGCTGCTCACTTGTAAAGCTGCTCAAGCTTTATAGGTCCTATCTAAAAGCGATTGATAGACC TTACTTAACTGCATTCAGCACGGCAATCCATGTCATTAAGTCTGGTGGCGACATTCCTTTCTTGAACTTACTAGATGCAG AATTATACAAGTTAGCACCGATCAAACGAGGGAGTGTTTCTAAAAAGACACAAGAGCTGTCCCCGTTTCATGACCCTTAT GGCACTAGGCATTTTGTTAGAGTGGATTTAGAGCGACAAGGGCTAAGTATGACCTTAATTAACGCGGTCATAGGTCATGA GAAACCAGGAGCAGAGGCATTGAGCTCATACTCTTCAGTAAGTAACGCAGCGATCAAAAGTGTTGGTTCTAATTTTGAGC AAATCGCTTTAGAACTTGGTTTGCAGGACTTTAGTGACATCATTTGTAAACTCATAGAGGTACACCCTTTTGTTAAAGAA TATATTTCCCCCGAAAATCGTTGA
Upstream 100 bases:
>100_bases AGTGGTTAGGATTTCACGGTAAGCGTAAGTTCATAATTGCTGACTATCTTGAGTGGGTGGGTATATCACAGTCTACGTTT GATCGATCGTGGGGTCGTCT
Downstream 100 bases:
>100_bases CGGCTATGCAAGTCCATGGCGTGATGGTGGGTATCAGCTCAAGGTTAACGAGCAGAGTGTCGGTAAGGATCGTTATGAAA AATATAAGCACAATGTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKDSAEEMVIVDLADLQKALELATSELDTELVEALNELIIDLHRAVTSEISLKEVDLSRLAEINFFDYQISRKWFKGKSL EHQLIAILIDATSKDTNKSLWIAVVLYISLVLKIHGKDKESERLIKRFKTAYFYKTRNYQWIWNELPNLDKTEEVTHALI LNTFALMLDKLNENKAEAEANRVRGIVETEATTKFRDKKLNQISEIKKYIEAAYYPHRKSPKKAPKPKTKSKSTSTNKNE GEGRTKKLRPPTLSDNVERTPAATSFNDIDSPISKRDWAVFDAFYVPDSTIDYATKEEAFDVMPPRVEIYWPKTQTQNRG RRSFELDAVDFSVKQQHISLKELELPSDVNMLSTTSCKLIFNQLSSDWKSNDKKMSLIAAILLLSMITACPVASLIEKGF IEKSGLFYIGKRKGYLQSKLGVTTIEEYSDNNLNSTDLIKIPLPVSLLKAAIEASKSQIKIEDIEAYVKRLKESLNIVYT TISRIESALHFILRRFVEGSNSHIADILCRIDASQAAAKYYSSHSHQELIGHYKKALQFMNIHNCFDLDYIDSHSEDFLT GSGFALKLESVRQFFQRLRSWVIESQGEKELFNRFSVFSWYCFCILTGTRPNNGLPNAKDLDLQVGWYQVADKPNKVTQN HRLIPLCCSLVKLLKLYRSYLKAIDRPYLTAFSTAIHVIKSGGDIPFLNLLDAELYKLAPIKRGSVSKKTQELSPFHDPY GTRHFVRVDLERQGLSMTLINAVIGHEKPGAEALSSYSSVSNAAIKSVGSNFEQIALELGLQDFSDIICKLIEVHPFVKE YISPENR
Sequences:
>Translated_807_residues MKDSAEEMVIVDLADLQKALELATSELDTELVEALNELIIDLHRAVTSEISLKEVDLSRLAEINFFDYQISRKWFKGKSL EHQLIAILIDATSKDTNKSLWIAVVLYISLVLKIHGKDKESERLIKRFKTAYFYKTRNYQWIWNELPNLDKTEEVTHALI LNTFALMLDKLNENKAEAEANRVRGIVETEATTKFRDKKLNQISEIKKYIEAAYYPHRKSPKKAPKPKTKSKSTSTNKNE GEGRTKKLRPPTLSDNVERTPAATSFNDIDSPISKRDWAVFDAFYVPDSTIDYATKEEAFDVMPPRVEIYWPKTQTQNRG RRSFELDAVDFSVKQQHISLKELELPSDVNMLSTTSCKLIFNQLSSDWKSNDKKMSLIAAILLLSMITACPVASLIEKGF IEKSGLFYIGKRKGYLQSKLGVTTIEEYSDNNLNSTDLIKIPLPVSLLKAAIEASKSQIKIEDIEAYVKRLKESLNIVYT TISRIESALHFILRRFVEGSNSHIADILCRIDASQAAAKYYSSHSHQELIGHYKKALQFMNIHNCFDLDYIDSHSEDFLT GSGFALKLESVRQFFQRLRSWVIESQGEKELFNRFSVFSWYCFCILTGTRPNNGLPNAKDLDLQVGWYQVADKPNKVTQN HRLIPLCCSLVKLLKLYRSYLKAIDRPYLTAFSTAIHVIKSGGDIPFLNLLDAELYKLAPIKRGSVSKKTQELSPFHDPY GTRHFVRVDLERQGLSMTLINAVIGHEKPGAEALSSYSSVSNAAIKSVGSNFEQIALELGLQDFSDIICKLIEVHPFVKE YISPENR >Mature_807_residues MKDSAEEMVIVDLADLQKALELATSELDTELVEALNELIIDLHRAVTSEISLKEVDLSRLAEINFFDYQISRKWFKGKSL EHQLIAILIDATSKDTNKSLWIAVVLYISLVLKIHGKDKESERLIKRFKTAYFYKTRNYQWIWNELPNLDKTEEVTHALI LNTFALMLDKLNENKAEAEANRVRGIVETEATTKFRDKKLNQISEIKKYIEAAYYPHRKSPKKAPKPKTKSKSTSTNKNE GEGRTKKLRPPTLSDNVERTPAATSFNDIDSPISKRDWAVFDAFYVPDSTIDYATKEEAFDVMPPRVEIYWPKTQTQNRG RRSFELDAVDFSVKQQHISLKELELPSDVNMLSTTSCKLIFNQLSSDWKSNDKKMSLIAAILLLSMITACPVASLIEKGF IEKSGLFYIGKRKGYLQSKLGVTTIEEYSDNNLNSTDLIKIPLPVSLLKAAIEASKSQIKIEDIEAYVKRLKESLNIVYT TISRIESALHFILRRFVEGSNSHIADILCRIDASQAAAKYYSSHSHQELIGHYKKALQFMNIHNCFDLDYIDSHSEDFLT GSGFALKLESVRQFFQRLRSWVIESQGEKELFNRFSVFSWYCFCILTGTRPNNGLPNAKDLDLQVGWYQVADKPNKVTQN HRLIPLCCSLVKLLKLYRSYLKAIDRPYLTAFSTAIHVIKSGGDIPFLNLLDAELYKLAPIKRGSVSKKTQELSPFHDPY GTRHFVRVDLERQGLSMTLINAVIGHEKPGAEALSSYSSVSNAAIKSVGSNFEQIALELGLQDFSDIICKLIEVHPFVKE YISPENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91940; Mature: 91940
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSAEEMVIVDLADLQKALELATSELDTELVEALNELIIDLHRAVTSEISLKEVDLSRL CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AEINFFDYQISRKWFKGKSLEHQLIAILIDATSKDTNKSLWIAVVLYISLVLKIHGKDKE HHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCH SERLIKRFKTAYFYKTRNYQWIWNELPNLDKTEEVTHALILNTFALMLDKLNENKAEAEA HHHHHHHHHHHHEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NRVRGIVETEATTKFRDKKLNQISEIKKYIEAAYYPHRKSPKKAPKPKTKSKSTSTNKNE HHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEGRTKKLRPPTLSDNVERTPAATSFNDIDSPISKRDWAVFDAFYVPDSTIDYATKEEAF CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH DVMPPRVEIYWPKTQTQNRGRRSFELDAVDFSVKQQHISLKELELPSDVNMLSTTSCKLI CCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH FNQLSSDWKSNDKKMSLIAAILLLSMITACPVASLIEKGFIEKSGLFYIGKRKGYLQSKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCHHHHHC GVTTIEEYSDNNLNSTDLIKIPLPVSLLKAAIEASKSQIKIEDIEAYVKRLKESLNIVYT CCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH TISRIESALHFILRRFVEGSNSHIADILCRIDASQAAAKYYSSHSHQELIGHYKKALQFM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH NIHNCFDLDYIDSHSEDFLTGSGFALKLESVRQFFQRLRSWVIESQGEKELFNRFSVFSW HHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YCFCILTGTRPNNGLPNAKDLDLQVGWYQVADKPNKVTQNHRLIPLCCSLVKLLKLYRSY HHHHEEECCCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKAIDRPYLTAFSTAIHVIKSGGDIPFLNLLDAELYKLAPIKRGSVSKKTQELSPFHDPY HHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC GTRHFVRVDLERQGLSMTLINAVIGHEKPGAEALSSYSSVSNAAIKSVGSNFEQIALELG CCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LQDFSDIICKLIEVHPFVKEYISPENR HHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKDSAEEMVIVDLADLQKALELATSELDTELVEALNELIIDLHRAVTSEISLKEVDLSRL CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AEINFFDYQISRKWFKGKSLEHQLIAILIDATSKDTNKSLWIAVVLYISLVLKIHGKDKE HHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCH SERLIKRFKTAYFYKTRNYQWIWNELPNLDKTEEVTHALILNTFALMLDKLNENKAEAEA HHHHHHHHHHHHEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NRVRGIVETEATTKFRDKKLNQISEIKKYIEAAYYPHRKSPKKAPKPKTKSKSTSTNKNE HHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEGRTKKLRPPTLSDNVERTPAATSFNDIDSPISKRDWAVFDAFYVPDSTIDYATKEEAF CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH DVMPPRVEIYWPKTQTQNRGRRSFELDAVDFSVKQQHISLKELELPSDVNMLSTTSCKLI CCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH FNQLSSDWKSNDKKMSLIAAILLLSMITACPVASLIEKGFIEKSGLFYIGKRKGYLQSKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCHHHHHC GVTTIEEYSDNNLNSTDLIKIPLPVSLLKAAIEASKSQIKIEDIEAYVKRLKESLNIVYT CCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH TISRIESALHFILRRFVEGSNSHIADILCRIDASQAAAKYYSSHSHQELIGHYKKALQFM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH NIHNCFDLDYIDSHSEDFLTGSGFALKLESVRQFFQRLRSWVIESQGEKELFNRFSVFSW HHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YCFCILTGTRPNNGLPNAKDLDLQVGWYQVADKPNKVTQNHRLIPLCCSLVKLLKLYRSY HHHHEEECCCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKAIDRPYLTAFSTAIHVIKSGGDIPFLNLLDAELYKLAPIKRGSVSKKTQELSPFHDPY HHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC GTRHFVRVDLERQGLSMTLINAVIGHEKPGAEALSSYSSVSNAAIKSVGSNFEQIALELG CCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LQDFSDIICKLIEVHPFVKEYISPENR HHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA