Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 148652504

GI number: 148652504

Start: 835414

End: 836877

Strand: Direct

Name: qseC [H]

Synonym: PsycPRwf_0693

Alternate gene names: 148652504

Gene position: 835414-836877 (Clockwise)

Preceding gene: 148652503

Following gene: 148652505

Centisome position: 28.04

GC content: 46.11

Gene sequence:

>1464_bases
ATGAAAAGTATTCAGCAACGGCTATTAACATCGCTACTGATTGGTTTACCTTTGCTGTGGGTGCTTACCTCAAGCTTTAT
TGCGTGGAAGCTTTGGCACGAAATCAATGAGATGAATGACACCCAAATCACTCAAGTTGCCCGTTATTTAATAGGGGTCG
CCCCCAAAGAAGAGGACGATAAAGACCATCATAGGCAAAGGGATGATAACAAAAAGCACACGCCCAAAATCTATGCGTTA
AAAAGTAAGCAGCTATCAGGTGATCTTGGTGAGGCTGAGGATGACTATATGGGCTTTGCCATTTGGGATAAAAAAGGCCG
TCTATTAATGGCTGATGAAAATGGTCAATCATTTGCTTTTTTGCCAGACCAGCATGGGTTTTTAGAAGAGCATGATTCTG
CCTATCAGCGCCTCAACCCTTTTAGTAAGCGCTGGCGTTTATTTTACGTCCATGATGATCATGACTATGAAGGTCGGGTC
ATTGCCGTCGGACAGAACCTCAAATCTCGCCGAGAGATGATTACTGATGCCATGTCCGTGCAAGTGCTGCCGATGTTGAT
TGGGCTATTTGCATTTATGGGTTTGGTGGTGTGGCTGATCCGGCGGGGGTTTATGCCGTTAACTCAGATTAGTAGTGCGC
TTGAACAGCGTCAACCGCAAGATGATAGCCCCATCACAGCGGACGTGCCCAAAGAGATCCAACCGTTAGTGAGCGCCTTA
AATGTCTTGTTTGTAAAAGTCGCGGATACCCTAGCACGTGAGCAGCGCTTTACCGCCGATGCCTCACATGAGCTTAGAAG
CCCGCTTGCGGCGTTAAAGCTACAAGCTGATTTGTTACAGCAGCAGATATTGCAGTTATCTGGCGTAGAAGACGATAATC
AGCTATTCTATCATGCCCAAAACATTAGCAATGGCATTGAGCGGGCCACTCATTTGGTCGATCAACTGCTGATTTTAGCC
AAAATAGAACCGCAACAACAATTACCTCCTGAGCAATTAGAAAGTCCGGATTGGTTGATGCTAACGGATATTGTACTCAG
TGATGTCAATCGGCTGGCTCGTGAAAAGCACATGCAATTAAAACGCACTGTGAACTGTGACAATCCTGCTGATATTCTAC
CCATCCTTATCAATCCAATTTTATTCAAACTGCTCATCCGTAACCTGTTGGACAATGCCATTCGCTATTGTCCCGAGGGC
GCTTTGATTGAACTTCAGCTCGACACCAATGCTATTAGAGTGGTCGATAATGGCAGTGGCGTCGAGCCAGAACAACTGAC
GCGCTTAAGCGAGCGCTTTTATCGCCCAGCAGGTCAAAGCCAATTAGGTAGCGGTCTTGGGCTATCCATTGCCAATCGAA
TAGCAGAGCTGCACGGTCTGACGTTAGAGTTTGCTAACCGCTCTCAACCAGAAACTGGCTTTATCGTCACGATAAGACAT
AAAAAAGCGATATCAAGCATCTGA

Upstream 100 bases:

>100_bases
GGCTACTATCTCAATCCAGTCCATAACCACCATTAACCACCGTTAGGCATTCAACGGTCTGTTTTTGGTGCCTCCACTTT
GTCTGCTACTTGGTGAGCCT

Downstream 100 bases:

>100_bases
TAAAACGATAAAAATTAATCGGCGTGGGCTTAAGGTTGAGTTAATATTTACCCCGTATGCTAGTTGTATTCCCTAATAAT
ATAGACGGAGTACAATCTTA

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKSIQQRLLTSLLIGLPLLWVLTSSFIAWKLWHEINEMNDTQITQVARYLIGVAPKEEDDKDHHRQRDDNKKHTPKIYAL
KSKQLSGDLGEAEDDYMGFAIWDKKGRLLMADENGQSFAFLPDQHGFLEEHDSAYQRLNPFSKRWRLFYVHDDHDYEGRV
IAVGQNLKSRREMITDAMSVQVLPMLIGLFAFMGLVVWLIRRGFMPLTQISSALEQRQPQDDSPITADVPKEIQPLVSAL
NVLFVKVADTLAREQRFTADASHELRSPLAALKLQADLLQQQILQLSGVEDDNQLFYHAQNISNGIERATHLVDQLLILA
KIEPQQQLPPEQLESPDWLMLTDIVLSDVNRLAREKHMQLKRTVNCDNPADILPILINPILFKLLIRNLLDNAIRYCPEG
ALIELQLDTNAIRVVDNGSGVEPEQLTRLSERFYRPAGQSQLGSGLGLSIANRIAELHGLTLEFANRSQPETGFIVTIRH
KKAISSI

Sequences:

>Translated_487_residues
MKSIQQRLLTSLLIGLPLLWVLTSSFIAWKLWHEINEMNDTQITQVARYLIGVAPKEEDDKDHHRQRDDNKKHTPKIYAL
KSKQLSGDLGEAEDDYMGFAIWDKKGRLLMADENGQSFAFLPDQHGFLEEHDSAYQRLNPFSKRWRLFYVHDDHDYEGRV
IAVGQNLKSRREMITDAMSVQVLPMLIGLFAFMGLVVWLIRRGFMPLTQISSALEQRQPQDDSPITADVPKEIQPLVSAL
NVLFVKVADTLAREQRFTADASHELRSPLAALKLQADLLQQQILQLSGVEDDNQLFYHAQNISNGIERATHLVDQLLILA
KIEPQQQLPPEQLESPDWLMLTDIVLSDVNRLAREKHMQLKRTVNCDNPADILPILINPILFKLLIRNLLDNAIRYCPEG
ALIELQLDTNAIRVVDNGSGVEPEQLTRLSERFYRPAGQSQLGSGLGLSIANRIAELHGLTLEFANRSQPETGFIVTIRH
KKAISSI
>Mature_487_residues
MKSIQQRLLTSLLIGLPLLWVLTSSFIAWKLWHEINEMNDTQITQVARYLIGVAPKEEDDKDHHRQRDDNKKHTPKIYAL
KSKQLSGDLGEAEDDYMGFAIWDKKGRLLMADENGQSFAFLPDQHGFLEEHDSAYQRLNPFSKRWRLFYVHDDHDYEGRV
IAVGQNLKSRREMITDAMSVQVLPMLIGLFAFMGLVVWLIRRGFMPLTQISSALEQRQPQDDSPITADVPKEIQPLVSAL
NVLFVKVADTLAREQRFTADASHELRSPLAALKLQADLLQQQILQLSGVEDDNQLFYHAQNISNGIERATHLVDQLLILA
KIEPQQQLPPEQLESPDWLMLTDIVLSDVNRLAREKHMQLKRTVNCDNPADILPILINPILFKLLIRNLLDNAIRYCPEG
ALIELQLDTNAIRVVDNGSGVEPEQLTRLSERFYRPAGQSQLGSGLGLSIANRIAELHGLTLEFANRSQPETGFIVTIRH
KKAISSI

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=472, Percent_Identity=36.228813559322, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1790551, Length=319, Percent_Identity=29.7805642633229, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1786783, Length=314, Percent_Identity=26.7515923566879, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1788279, Length=308, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1790861, Length=304, Percent_Identity=27.9605263157895, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=30.9012875536481, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786600, Length=210, Percent_Identity=31.9047619047619, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=28.3261802575107, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=23.5042735042735, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788713, Length=259, Percent_Identity=29.3436293436293, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55375; Mature: 55375

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIQQRLLTSLLIGLPLLWVLTSSFIAWKLWHEINEMNDTQITQVARYLIGVAPKEEDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
KDHHRQRDDNKKHTPKIYALKSKQLSGDLGEAEDDYMGFAIWDKKGRLLMADENGQSFAF
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEE
LPDQHGFLEEHDSAYQRLNPFSKRWRLFYVHDDHDYEGRVIAVGQNLKSRREMITDAMSV
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH
QVLPMLIGLFAFMGLVVWLIRRGFMPLTQISSALEQRQPQDDSPITADVPKEIQPLVSAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
NVLFVKVADTLAREQRFTADASHELRSPLAALKLQADLLQQQILQLSGVEDDNQLFYHAQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
NISNGIERATHLVDQLLILAKIEPQQQLPPEQLESPDWLMLTDIVLSDVNRLAREKHMQL
HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
KRTVNCDNPADILPILINPILFKLLIRNLLDNAIRYCPEGALIELQLDTNAIRVVDNGSG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCC
VEPEQLTRLSERFYRPAGQSQLGSGLGLSIANRIAELHGLTLEFANRSQPETGFIVTIRH
CCHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC
KKAISSI
HHHHCCC
>Mature Secondary Structure
MKSIQQRLLTSLLIGLPLLWVLTSSFIAWKLWHEINEMNDTQITQVARYLIGVAPKEEDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
KDHHRQRDDNKKHTPKIYALKSKQLSGDLGEAEDDYMGFAIWDKKGRLLMADENGQSFAF
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEE
LPDQHGFLEEHDSAYQRLNPFSKRWRLFYVHDDHDYEGRVIAVGQNLKSRREMITDAMSV
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH
QVLPMLIGLFAFMGLVVWLIRRGFMPLTQISSALEQRQPQDDSPITADVPKEIQPLVSAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
NVLFVKVADTLAREQRFTADASHELRSPLAALKLQADLLQQQILQLSGVEDDNQLFYHAQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
NISNGIERATHLVDQLLILAKIEPQQQLPPEQLESPDWLMLTDIVLSDVNRLAREKHMQL
HHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
KRTVNCDNPADILPILINPILFKLLIRNLLDNAIRYCPEGALIELQLDTNAIRVVDNGSG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCC
VEPEQLTRLSERFYRPAGQSQLGSGLGLSIANRIAELHGLTLEFANRSQPETGFIVTIRH
CCHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC
KKAISSI
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]