Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is feoB [H]
Identifier: 148652487
GI number: 148652487
Start: 819423
End: 821333
Strand: Direct
Name: feoB [H]
Synonym: PsycPRwf_0676
Alternate gene names: 148652487
Gene position: 819423-821333 (Clockwise)
Preceding gene: 148652486
Following gene: 148652489
Centisome position: 27.51
GC content: 48.67
Gene sequence:
>1911_bases ATGTCAACATCCTCTTTAGCCAGTGCCGCCACTGAGGGCAGCATAGCCCCCATTACTATCGCGCTGGTCGGCGCCCCAAA TTGTGGCAAAACCGCTTTGTTCAATGTTTTGACCGGCTCAAAAGCCAAAGTGGCTAACTATTCAGGTGTTACGGTCGATA AGCGCTCAGCGCCTTTTATTAATCAAAGCCAGGTCAGGATTTTGGATTTGCCAGGCACTTATAGCCTAGCAACCACAAGT CCCGATGAAGAGGTCACTCGAAAGGTCTTGATGGGTGAGATGCCCAGTGAGTCTATCCCCGATGCCATCTTGGTGGTTGC TGATGCCACCAACTTACGGATGTCGTTAAGGATGATTCTTGAGCTAAAAAGCTTGGGTCTACCGATGATGGTGGCATTAA ACCTAAATGATGTGGCAGTCAGCCGCGGTATGGTTGTCAATGAAGACAAACTCTCTGAGCAGCTTGGGGTACCTGTGGTA AAAACGGTGGCTATCAAGCGCCGCGCTAATGATGCTTTATTGTCATTAATTAAAGAGTTCTCGCAGCGCCAACACCGCCA CATAAGGCCAGTACGCTTCGCCCAAGATGTACCCGATCCACAGCAGCTGTATCAACGCGCTGATGAGATAATCAGCCAAA CCGTTTCTACACCGCACAGATTGCCTAAGTGGCATGAGCGTTTAGATTATTGGGTGCTGCATCCTGTGGCGGGGGTGGTT ATATTGCTAAGTATATTGTTTGTGATTTTCCAAGCCATCTATGCTTGGGCCGCCCCTATGATGGATGGGCTAGAGCTGTT GGTAAATGGCTTTGGGACGATGATAGCCAGTTACTTACCTGAGGGTATCTTAAAAAGTCTACTGGTAGACGGTATTATTG CTGGGGTTGGCAGTGTGGTGGTGTTTGTGCCTCAGATTGCCTTACTGTTTTTATTCTTGTTAATTTTGGAAGATTCGGGC TATCTGCCGCGCGCCGCCTTTTTATTAGATACGTTATTGTCCAAAGTAGGGCTGTCAGGCCGCTCTTTTATCCCGCTCTT ATCTGGGTTTGCTTGTGCTGTACCGGCTGTTATGTCGACCCGTACCATTCCAAACCCTAAAGAGCGCTTTGTGTCCATAG CGGTATTGCCTATGCTCACTTGCTCGGCGAGGTTACCTATTTACGCATTGATCATAGCTGCGGTGATACCCAATAAGAGC GTGTTTGGGCTTTTTAATTTGCAAGGGATGACCTTATTTGTGTTATATACCGCAGGTATTGTGTCCGCCTTATTCATCTC TTGGCTAATGACCCGAGTGGGACGCAGTAAAAGCGATGCAGCCAGCTTTCCGTTATTGATGGAGCTGCCCACTTATCGTA TGCCCAATGTCAAGCATATTGCCACTGAGCTGTGGAGCAAGGTTAAGGCCTTTTTGGTACGGGCAGGGACCGTGATCTTT GCATTAAGCGTGCTGCTATGGGCCTTGGTGAGCTTTCCCTCAGCACCAATAGGCAGTACAGATCCAGCCATCAACTACAG TTTTGCCGGCATGCTTGGCCATGTTATTGAGCCAATTTTTAGCTCCATCGGCTTTACTTGGCAGATGTGCATTGCCATGA TTCCGGGTCTGGCCGCCCGCGAGGTGGTGGTGGCGGCGCTAGGTACTGTATATGCTGTGGGCAATGTCGGTGAAGAAGCG GTGAGCCATACTCTAATGCCGATTATCCATAATCAGTGGGGATTGGCCACAGCGTTTTCCTTTTTGGCCTTTTATATTTA TGCCCCCATGTGTCTGGCAACGTTGACCGTGATTCGCAGAGAAACCAAATCTTTGCCGCAGACCTTAGCCATTACCGGCT ATTTGTTTGCCTTAGCCTATGTGATGGCGTGGATAACGTACCAAGTTGCAGGTTTTATTTTTGGTCTATAA
Upstream 100 bases:
>100_bases GCGTCTTGATGAGCTACAAAAAATTCGCTGCAAGGCGTTATAGCCCCAGATACCTGTCCTCATTTTTGTAGGCTTTTTTT ACCGATAAGTGACTCCCCGT
Downstream 100 bases:
>100_bases ATTATTGGAGTAATAAGCGATGTCTCATGTTGTCGAATATGGCCTGGTGTTTATTATTATCGCCTTGGCTTTATATTATG TGTGGACTAGAGTATTGTTC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MSTSSLASAATEGSIAPITIALVGAPNCGKTALFNVLTGSKAKVANYSGVTVDKRSAPFINQSQVRILDLPGTYSLATTS PDEEVTRKVLMGEMPSESIPDAILVVADATNLRMSLRMILELKSLGLPMMVALNLNDVAVSRGMVVNEDKLSEQLGVPVV KTVAIKRRANDALLSLIKEFSQRQHRHIRPVRFAQDVPDPQQLYQRADEIISQTVSTPHRLPKWHERLDYWVLHPVAGVV ILLSILFVIFQAIYAWAAPMMDGLELLVNGFGTMIASYLPEGILKSLLVDGIIAGVGSVVVFVPQIALLFLFLLILEDSG YLPRAAFLLDTLLSKVGLSGRSFIPLLSGFACAVPAVMSTRTIPNPKERFVSIAVLPMLTCSARLPIYALIIAAVIPNKS VFGLFNLQGMTLFVLYTAGIVSALFISWLMTRVGRSKSDAASFPLLMELPTYRMPNVKHIATELWSKVKAFLVRAGTVIF ALSVLLWALVSFPSAPIGSTDPAINYSFAGMLGHVIEPIFSSIGFTWQMCIAMIPGLAAREVVVAALGTVYAVGNVGEEA VSHTLMPIIHNQWGLATAFSFLAFYIYAPMCLATLTVIRRETKSLPQTLAITGYLFALAYVMAWITYQVAGFIFGL
Sequences:
>Translated_636_residues MSTSSLASAATEGSIAPITIALVGAPNCGKTALFNVLTGSKAKVANYSGVTVDKRSAPFINQSQVRILDLPGTYSLATTS PDEEVTRKVLMGEMPSESIPDAILVVADATNLRMSLRMILELKSLGLPMMVALNLNDVAVSRGMVVNEDKLSEQLGVPVV KTVAIKRRANDALLSLIKEFSQRQHRHIRPVRFAQDVPDPQQLYQRADEIISQTVSTPHRLPKWHERLDYWVLHPVAGVV ILLSILFVIFQAIYAWAAPMMDGLELLVNGFGTMIASYLPEGILKSLLVDGIIAGVGSVVVFVPQIALLFLFLLILEDSG YLPRAAFLLDTLLSKVGLSGRSFIPLLSGFACAVPAVMSTRTIPNPKERFVSIAVLPMLTCSARLPIYALIIAAVIPNKS VFGLFNLQGMTLFVLYTAGIVSALFISWLMTRVGRSKSDAASFPLLMELPTYRMPNVKHIATELWSKVKAFLVRAGTVIF ALSVLLWALVSFPSAPIGSTDPAINYSFAGMLGHVIEPIFSSIGFTWQMCIAMIPGLAAREVVVAALGTVYAVGNVGEEA VSHTLMPIIHNQWGLATAFSFLAFYIYAPMCLATLTVIRRETKSLPQTLAITGYLFALAYVMAWITYQVAGFIFGL >Mature_635_residues STSSLASAATEGSIAPITIALVGAPNCGKTALFNVLTGSKAKVANYSGVTVDKRSAPFINQSQVRILDLPGTYSLATTSP DEEVTRKVLMGEMPSESIPDAILVVADATNLRMSLRMILELKSLGLPMMVALNLNDVAVSRGMVVNEDKLSEQLGVPVVK TVAIKRRANDALLSLIKEFSQRQHRHIRPVRFAQDVPDPQQLYQRADEIISQTVSTPHRLPKWHERLDYWVLHPVAGVVI LLSILFVIFQAIYAWAAPMMDGLELLVNGFGTMIASYLPEGILKSLLVDGIIAGVGSVVVFVPQIALLFLFLLILEDSGY LPRAAFLLDTLLSKVGLSGRSFIPLLSGFACAVPAVMSTRTIPNPKERFVSIAVLPMLTCSARLPIYALIIAAVIPNKSV FGLFNLQGMTLFVLYTAGIVSALFISWLMTRVGRSKSDAASFPLLMELPTYRMPNVKHIATELWSKVKAFLVRAGTVIFA LSVLLWALVSFPSAPIGSTDPAINYSFAGMLGHVIEPIFSSIGFTWQMCIAMIPGLAAREVVVAALGTVYAVGNVGEEAV SHTLMPIIHNQWGLATAFSFLAFYIYAPMCLATLTVIRRETKSLPQTLAITGYLFALAYVMAWITYQVAGFIFGL
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=743, Percent_Identity=31.0901749663526, Blast_Score=279, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 69013; Mature: 68881
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSLASAATEGSIAPITIALVGAPNCGKTALFNVLTGSKAKVANYSGVTVDKRSAPFI CCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC NQSQVRILDLPGTYSLATTSPDEEVTRKVLMGEMPSESIPDAILVVADATNLRMSLRMIL CCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHH ELKSLGLPMMVALNLNDVAVSRGMVVNEDKLSEQLGVPVVKTVAIKRRANDALLSLIKEF HHHHCCCCEEEEECCCHHHHHCCEEECHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHH SQRQHRHIRPVRFAQDVPDPQQLYQRADEIISQTVSTPHRLPKWHERLDYWVLHPVAGVV HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ILLSILFVIFQAIYAWAAPMMDGLELLVNGFGTMIASYLPEGILKSLLVDGIIAGVGSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VFVPQIALLFLFLLILEDSGYLPRAAFLLDTLLSKVGLSGRSFIPLLSGFACAVPAVMST HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RTIPNPKERFVSIAVLPMLTCSARLPIYALIIAAVIPNKSVFGLFNLQGMTLFVLYTAGI CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH VSALFISWLMTRVGRSKSDAASFPLLMELPTYRMPNVKHIATELWSKVKAFLVRAGTVIF HHHHHHHHHHHHHCCCCCCHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALSVLLWALVSFPSAPIGSTDPAINYSFAGMLGHVIEPIFSSIGFTWQMCIAMIPGLAAR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHH EVVVAALGTVYAVGNVGEEAVSHTLMPIIHNQWGLATAFSFLAFYIYAPMCLATLTVIRR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETKSLPQTLAITGYLFALAYVMAWITYQVAGFIFGL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STSSLASAATEGSIAPITIALVGAPNCGKTALFNVLTGSKAKVANYSGVTVDKRSAPFI CCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC NQSQVRILDLPGTYSLATTSPDEEVTRKVLMGEMPSESIPDAILVVADATNLRMSLRMIL CCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHH ELKSLGLPMMVALNLNDVAVSRGMVVNEDKLSEQLGVPVVKTVAIKRRANDALLSLIKEF HHHHCCCCEEEEECCCHHHHHCCEEECHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHH SQRQHRHIRPVRFAQDVPDPQQLYQRADEIISQTVSTPHRLPKWHERLDYWVLHPVAGVV HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ILLSILFVIFQAIYAWAAPMMDGLELLVNGFGTMIASYLPEGILKSLLVDGIIAGVGSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VFVPQIALLFLFLLILEDSGYLPRAAFLLDTLLSKVGLSGRSFIPLLSGFACAVPAVMST HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RTIPNPKERFVSIAVLPMLTCSARLPIYALIIAAVIPNKSVFGLFNLQGMTLFVLYTAGI CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH VSALFISWLMTRVGRSKSDAASFPLLMELPTYRMPNVKHIATELWSKVKAFLVRAGTVIF HHHHHHHHHHHHHCCCCCCHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALSVLLWALVSFPSAPIGSTDPAINYSFAGMLGHVIEPIFSSIGFTWQMCIAMIPGLAAR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHH EVVVAALGTVYAVGNVGEEAVSHTLMPIIHNQWGLATAFSFLAFYIYAPMCLATLTVIRR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETKSLPQTLAITGYLFALAYVMAWITYQVAGFIFGL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA