Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652461
Identifier: 148652461
GI number: 148652461
Start: 784052
End: 784726
Strand: Direct
Name: 148652461
Synonym: PsycPRwf_0649
Alternate gene names: NA
Gene position: 784052-784726 (Clockwise)
Preceding gene: 148652460
Following gene: 148652469
Centisome position: 26.32
GC content: 45.48
Gene sequence:
>675_bases ATGAATCAACAAAATTTGGGCAATACAGATATCAGTCATAGCGCCCACCTGCCGTTTTCGCAAGCATGTGAGAATAATAA ACAGCCTATTTTAGAGGTATTGCAGCGCCAGTTGTCAGCTCATCACTATGTATTAGAGGTGGGCTCAGGGACAGGGCAGC ATAGTGTTTACTTTGCACCCAGACTGCCGCATTTGCAGTGGCAAACAAGCGATGTGGTGGATAATCATGGGGTGATTCAA GGTTGGCATGACAAGTACCCTGCGTCAAACTTACACGCACCGCTGGCCTTTGATTTGACCCGTGATGGCATACCCATAGC AGTGAGCGCGCCATCTTATCCAGATAAAAATTCGCCCTACGATGCTGTTTTTACCGCCAATACCCTGCATATTATTGCTT GGCCGCTGGTTGAGAGGTTGTTTGAGCTGGTAGGGGATGCCTTGCCGACTCATGGCAAATTTATTGTCTATGGGCCATTT AATGACAACGGTCAGTATAGTAGCGATAGCAATCAGCGCTTTGATAGGCATTTGCGTCAGCGTGATCCAAACAGTGGTAT CCGTGACAAAGTCGATATTATGCATTTAGCCAAACAGCACCATCTAGTTTTAGCCAATCGCTATAGTATGCCGGCCAATA ATGAGATATTGGTGTTTGAAAAATCTGATATTTAA
Upstream 100 bases:
>100_bases GCAGCGGGTGTTGAGGCAGGTATTTATTAACTCAAGTTTTATGTGCTTATGAGTGATCATCAGCACAGAGACCGTAGACT GATTATCTAAGAGGGGTGTT
Downstream 100 bases:
>100_bases AACCTCAAGTGAATATAACGTTAACGTTAATAGCATGGCAGACCCTACAGGAAGCATTTCGCTAATAGTGCTTCAGACCA ATGGTGCGTAGGGTACCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNQQNLGNTDISHSAHLPFSQACENNKQPILEVLQRQLSAHHYVLEVGSGTGQHSVYFAPRLPHLQWQTSDVVDNHGVIQ GWHDKYPASNLHAPLAFDLTRDGIPIAVSAPSYPDKNSPYDAVFTANTLHIIAWPLVERLFELVGDALPTHGKFIVYGPF NDNGQYSSDSNQRFDRHLRQRDPNSGIRDKVDIMHLAKQHHLVLANRYSMPANNEILVFEKSDI
Sequences:
>Translated_224_residues MNQQNLGNTDISHSAHLPFSQACENNKQPILEVLQRQLSAHHYVLEVGSGTGQHSVYFAPRLPHLQWQTSDVVDNHGVIQ GWHDKYPASNLHAPLAFDLTRDGIPIAVSAPSYPDKNSPYDAVFTANTLHIIAWPLVERLFELVGDALPTHGKFIVYGPF NDNGQYSSDSNQRFDRHLRQRDPNSGIRDKVDIMHLAKQHHLVLANRYSMPANNEILVFEKSDI >Mature_224_residues MNQQNLGNTDISHSAHLPFSQACENNKQPILEVLQRQLSAHHYVLEVGSGTGQHSVYFAPRLPHLQWQTSDVVDNHGVIQ GWHDKYPASNLHAPLAFDLTRDGIPIAVSAPSYPDKNSPYDAVFTANTLHIIAWPLVERLFELVGDALPTHGKFIVYGPF NDNGQYSSDSNQRFDRHLRQRDPNSGIRDKVDIMHLAKQHHLVLANRYSMPANNEILVFEKSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=208, Percent_Identity=35.5769230769231, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=33.4975369458128, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI28574095, Length=204, Percent_Identity=35.7843137254902, Blast_Score=123, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25273; Mature: 25273
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQNLGNTDISHSAHLPFSQACENNKQPILEVLQRQLSAHHYVLEVGSGTGQHSVYFAP CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEECC RLPHLQWQTSDVVDNHGVIQGWHDKYPASNLHAPLAFDLTRDGIPIAVSAPSYPDKNSPY CCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC DAVFTANTLHIIAWPLVERLFELVGDALPTHGKFIVYGPFNDNGQYSSDSNQRFDRHLRQ CEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH RDPNSGIRDKVDIMHLAKQHHLVLANRYSMPANNEILVFEKSDI CCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEEECCCC >Mature Secondary Structure MNQQNLGNTDISHSAHLPFSQACENNKQPILEVLQRQLSAHHYVLEVGSGTGQHSVYFAP CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEECC RLPHLQWQTSDVVDNHGVIQGWHDKYPASNLHAPLAFDLTRDGIPIAVSAPSYPDKNSPY CCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC DAVFTANTLHIIAWPLVERLFELVGDALPTHGKFIVYGPFNDNGQYSSDSNQRFDRHLRQ CEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH RDPNSGIRDKVDIMHLAKQHHLVLANRYSMPANNEILVFEKSDI CCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA