Click here to switch to the map view.

The map label for this gene is yhiR [C]

Identifier: 148652456

GI number: 148652456

Start: 774303

End: 775178

Strand: Direct

Name: yhiR [C]

Synonym: PsycPRwf_0644

Alternate gene names: 148652456

Gene position: 774303-775178 (Clockwise)

Preceding gene: 148652453

Following gene: 148652457

Centisome position: 25.99

GC content: 45.21

Gene sequence:

>876_bases
ATGAATTACAAACATGCCTATCACGCCGGTAATTTTGCCGACGTTGCCAAACACATTTTACTGGTACAACTGCTGAATCA
AATGAGCAAAAAGGGCAAACCTTATTATGCTCTTGATGCTTACGGTGGTCGTGGTCTTTACTCACTAAGCAGTGAAGAGG
CACGAAAAACAGGCGAAGCCAAAGCCGGTGTCCAAAAGATTTTGGAGGCTGATGTCTCTGAAGCACCTGAAGCGGTTCGT
CAGTATGTAGACGATATCAAACAAGCCCGTCAGACTTATGACAAGTATGTCTATCCAGGATCACCTTGGTGGATCGCCAA
TCATGTTGAAAAACATCCTGAAGTTAAGGTGCGCGCAGAAGCTTTTGAGTTTAAAAACACCGAATACGATGCCCTAAACT
ATCAGCTGTATCAATTGCCTATCGGTATTCACAACCGTGATGCCTTTGAAGGTATTCGCGCAGTGATCCCGCCCGTAGAG
CGCCGCGGTGTGATTTTAATTGATCCGCCTTATGAGCAAGAGCACAAAGACTTTACTCGTTTAGTAGAGCTGTTGGTCGC
TTCTATGACCAAGTGGCCACAAGGCGTGTATGCGTTATGGTTTCCTATCAAAAATATTGAAGCGGTTGAGCTTTTTTATA
AAAAGATGAAGCGTACCGGTATTCGTAAGCAGCTACTGTGTGAGCTAAATATTTATCCGAATGATGTGGCAGTGGGCCTA
AACGGTACCGGTATGCTCATTATTAATCCGCCTTGGCAGTTTGATCAACATGCGCGTCAGATTTTAAACTTCATCCAACC
TTTAATGCGCCCTGAAGATGCGCCTGATTTACCACAAAGCCAAGCGGTAAACGTGCGCTGGCTAGTGGGCGAATAG

Upstream 100 bases:

>100_bases
GGGTACTATTAACCATTAATATACTCATTTTAAACCAGCTTATGCTACCATAGAACTAATTTTTGATAATGAACCTTTCT
ACACTAAAACAAGCTAACTT

Downstream 100 bases:

>100_bases
CGATTAGTAGAAAACGAATTGACGAATAATTGCAGGTTAGATCCTAGAGGGATGTAGTATGACGACTCCAGATTCATCGC
AGCCAGATGAGGCACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNYKHAYHAGNFADVAKHILLVQLLNQMSKKGKPYYALDAYGGRGLYSLSSEEARKTGEAKAGVQKILEADVSEAPEAVR
QYVDDIKQARQTYDKYVYPGSPWWIANHVEKHPEVKVRAEAFEFKNTEYDALNYQLYQLPIGIHNRDAFEGIRAVIPPVE
RRGVILIDPPYEQEHKDFTRLVELLVASMTKWPQGVYALWFPIKNIEAVELFYKKMKRTGIRKQLLCELNIYPNDVAVGL
NGTGMLIINPPWQFDQHARQILNFIQPLMRPEDAPDLPQSQAVNVRWLVGE

Sequences:

>Translated_291_residues
MNYKHAYHAGNFADVAKHILLVQLLNQMSKKGKPYYALDAYGGRGLYSLSSEEARKTGEAKAGVQKILEADVSEAPEAVR
QYVDDIKQARQTYDKYVYPGSPWWIANHVEKHPEVKVRAEAFEFKNTEYDALNYQLYQLPIGIHNRDAFEGIRAVIPPVE
RRGVILIDPPYEQEHKDFTRLVELLVASMTKWPQGVYALWFPIKNIEAVELFYKKMKRTGIRKQLLCELNIYPNDVAVGL
NGTGMLIINPPWQFDQHARQILNFIQPLMRPEDAPDLPQSQAVNVRWLVGE
>Mature_291_residues
MNYKHAYHAGNFADVAKHILLVQLLNQMSKKGKPYYALDAYGGRGLYSLSSEEARKTGEAKAGVQKILEADVSEAPEAVR
QYVDDIKQARQTYDKYVYPGSPWWIANHVEKHPEVKVRAEAFEFKNTEYDALNYQLYQLPIGIHNRDAFEGIRAVIPPVE
RRGVILIDPPYEQEHKDFTRLVELLVASMTKWPQGVYALWFPIKNIEAVELFYKKMKRTGIRKQLLCELNIYPNDVAVGL
NGTGMLIINPPWQFDQHARQILNFIQPLMRPEDAPDLPQSQAVNVRWLVGE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=292, Percent_Identity=31.1643835616438, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 33454; Mature: 33454

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00092 N6_MTASE ; PS01090 TATD_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKHAYHAGNFADVAKHILLVQLLNQMSKKGKPYYALDAYGGRGLYSLSSEEARKTGEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHHCCHH
KAGVQKILEADVSEAPEAVRQYVDDIKQARQTYDKYVYPGSPWWIANHVEKHPEVKVRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCEEEEHH
AFEFKNTEYDALNYQLYQLPIGIHNRDAFEGIRAVIPPVERRGVILIDPPYEQEHKDFTR
HHHCCCCCCCHHCEEEEEECCCCCCCHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHHH
LVELLVASMTKWPQGVYALWFPIKNIEAVELFYKKMKRTGIRKQLLCELNIYPNDVAVGL
HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEEE
NGTGMLIINPPWQFDQHARQILNFIQPLMRPEDAPDLPQSQAVNVRWLVGE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNYKHAYHAGNFADVAKHILLVQLLNQMSKKGKPYYALDAYGGRGLYSLSSEEARKTGEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHHHCCHH
KAGVQKILEADVSEAPEAVRQYVDDIKQARQTYDKYVYPGSPWWIANHVEKHPEVKVRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCEEEEHH
AFEFKNTEYDALNYQLYQLPIGIHNRDAFEGIRAVIPPVERRGVILIDPPYEQEHKDFTR
HHHCCCCCCCHHCEEEEEECCCCCCCHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHHH
LVELLVASMTKWPQGVYALWFPIKNIEAVELFYKKMKRTGIRKQLLCELNIYPNDVAVGL
HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEEE
NGTGMLIINPPWQFDQHARQILNFIQPLMRPEDAPDLPQSQAVNVRWLVGE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]