Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is yaaA [C]
Identifier: 148652449
GI number: 148652449
Start: 767236
End: 768048
Strand: Direct
Name: yaaA [C]
Synonym: PsycPRwf_0637
Alternate gene names: 148652449
Gene position: 767236-768048 (Clockwise)
Preceding gene: 148652444
Following gene: 148652452
Centisome position: 25.76
GC content: 41.94
Gene sequence:
>813_bases ATGTATTTTGTATTGTCTCCTGCTAAGAGCTTAAATGAAAAAGATGCAGTGTCGGTGAAAGTCGGTAATTACTATAGTCA GCCTGAGCTAATTGAAGATGCTCAAGCATTGATGAAAATCTTGAAATCAAAGGAGCCAATAGATTTACAAGCGCTTATGA GCATCTCTGATGATTTGGCACAGCTTAATGCACAGCGCAATCAAGACTGGGCGTGGAGCGAGGACAAACCGTTTACTGAA GACAATGCCAAACCGGCCGGCTACCTGTTTGATGGCGATGTCTATACCGGTCTTGATATGTATAGTGCGGATAAACAAAC CGTTGTGTATTTAAATGAGCACCTAGGTATTTTGTCAGGGTTATATGGTGTCTTAAAGCCACTGGATATGATTCAGCCTT ACCGTTTGGAGATGGGCACTAAGCTTAAAAATGAGCAAGGCGATAACTTATATGAGTTTTGGGGCGAGCATATTACGGAT GTGATCAATCAGCGTATGAAAGACACAAGTGAGCAGGGCGAAGATAATATCCTGATTAACCTTGCCTCAAACGAATACTT TAAAGCGGTGAAGAAAAAATCACTGGATGCGGCTATCATCACCCCCCGTTTTGAAGATGAGAAAAATGGCAAATACAAAG TGATTAGCTTTTATGCCAAAAAAGCACGCGGTCTGATGGTGAGATATGCAGCTGATAATAAAATTACCAAGGCGGAAGAC TTAAAGCAGTTTGATTTGGCCGGCTACTATTATGTGGATGAGCTGTCTGATGATAAAACGTGGGTGTTTAGACGCGATGA GGCCAGTCAGTAA
Upstream 100 bases:
>100_bases GCGCTTATCGTAGCAGCGCAAAAGATGACTTATGTTTAATAACAATCAAAAATATCAGTTAAAGCATGTGGTTTAACCGC ACAAGGCTAAGGATAAAGTT
Downstream 100 bases:
>100_bases TTCGAAATGATTTTTAAAGTCAACGAATTAAAATAAATAAGCCAATAAAAAACCCCGATAAGCGATTGCCTATCGGGGTT TATTTACTACTGGATTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLAQLNAQRNQDWAWSEDKPFTE DNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSGLYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITD VINQRMKDTSEQGEDNILINLASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAED LKQFDLAGYYYVDELSDDKTWVFRRDEASQ
Sequences:
>Translated_270_residues MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLAQLNAQRNQDWAWSEDKPFTE DNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSGLYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITD VINQRMKDTSEQGEDNILINLASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAED LKQFDLAGYYYVDELSDDKTWVFRRDEASQ >Mature_270_residues MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLAQLNAQRNQDWAWSEDKPFTE DNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSGLYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITD VINQRMKDTSEQGEDNILINLASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAED LKQFDLAGYYYVDELSDDKTWVFRRDEASQ
Specific function: Unknown
COG id: COG3022
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0246 family
Homologues:
Organism=Escherichia coli, GI1786187, Length=268, Percent_Identity=47.0149253731343, Blast_Score=239, Evalue=1e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y637_PSYWF (A5WD51)
Other databases:
- EMBL: CP000713 - RefSeq: YP_001279542.1 - STRING: A5WD51 - GeneID: 5206379 - GenomeReviews: CP000713_GR - KEGG: prw:PsycPRwf_0637 - eggNOG: COG3022 - HOGENOM: HBG672409 - OMA: HITDVIN - ProtClustDB: PRK02101 - BioCyc: PSP56811:PSYCPRWF_0637-MONOMER - HAMAP: MF_00652 - InterPro: IPR005583
Pfam domain/function: PF03883 DUF328
EC number: NA
Molecular weight: Translated: 30946; Mature: 30946
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLA CEEEECCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QLNAQRNQDWAWSEDKPFTEDNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSG HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCEECCCCCEEEEEHHHHHHHHH LYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITDVINQRMKDTSEQGEDNILIN HHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAED ECCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEHHHCCCEEEEEECCCCCCCHHH LKQFDLAGYYYVDELSDDKTWVFRRDEASQ HHHHHCCCEEEEECCCCCCEEEEECCCCCC >Mature Secondary Structure MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLA CEEEECCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QLNAQRNQDWAWSEDKPFTEDNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSG HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCEECCCCCEEEEEHHHHHHHHH LYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITDVINQRMKDTSEQGEDNILIN HHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAED ECCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEHHHCCCEEEEEECCCCCCCHHH LKQFDLAGYYYVDELSDDKTWVFRRDEASQ HHHHHCCCEEEEECCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA