Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
---|---|
Accession | NC_009524 |
Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148652132
Identifier: 148652132
GI number: 148652132
Start: 385199
End: 385756
Strand: Direct
Name: 148652132
Synonym: PsycPRwf_0320
Alternate gene names: NA
Gene position: 385199-385756 (Clockwise)
Preceding gene: 148652129
Following gene: 148652134
Centisome position: 12.93
GC content: 48.03
Gene sequence:
>558_bases ATGAAAAAATTCGTACTAGGCTCAGTATTGGCCCTATCAGGTAGTTTGGCAATGGTAGGCTGCACGCAAGCCAGCGCTGT TTCAGAGTCACAAGCCAATCCAGCCACTCAAATGCAGCATAAACAAGGTGGCCATGGTCAGTATAAAGGCCATAAAGGTG GCCATGAAATGGGCCGTATGGGCAAAAAAGGTGCAGGTTTTGAGAAGCTAAACCTAACTGAGCAGCAAAAAGCACAGATG CAGGCTTTAAGAAAAGCGCAAATGGAAAAACGTCAAGGTGAGCGTGCACAGCGTCAAGCACAGATGCAGCAGACCCGTGC TCAAACCGAAGCTTTGATTAACAGTCCTACTATCAATGCCACTGCCTTAAACACGCTAGCCGATCGGCAGGCGGCCATTG CTAAGCAGCAGTTCGTTGAGCGCATTCAAGCTCAGCACGCAATGGCACAAATCTTAACCCCTGAACAAAAAGCGACGCTA AAACAGATGCGTGAAGAGCGTCAAGCTAAGTTCAAAAACAAAGCCAAAGGCGAGCACAAAGGCCAAACCACTCAATAA
Upstream 100 bases:
>100_bases ATCACTTATTACGCCAGTTATTTAATGTGTAGATAACGATGAGACAAGTGCTCGATATTAAGCTTGGCCCACCGACAAAT AGTAAATTATGGAGATTTAT
Downstream 100 bases:
>100_bases TTAAGGTTAGACAATGGGATTAACTGAGCTCATTGGGTTAATTTTGATACAATCTAGCTAACAAAAAGCGATCCTCGGAT CGCTTTTTTTGGTATCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKKFVLGSVLALSGSLAMVGCTQASAVSESQANPATQMQHKQGGHGQYKGHKGGHEMGRMGKKGAGFEKLNLTEQQKAQM QALRKAQMEKRQGERAQRQAQMQQTRAQTEALINSPTINATALNTLADRQAAIAKQQFVERIQAQHAMAQILTPEQKATL KQMREERQAKFKNKAKGEHKGQTTQ
Sequences:
>Translated_185_residues MKKFVLGSVLALSGSLAMVGCTQASAVSESQANPATQMQHKQGGHGQYKGHKGGHEMGRMGKKGAGFEKLNLTEQQKAQM QALRKAQMEKRQGERAQRQAQMQQTRAQTEALINSPTINATALNTLADRQAAIAKQQFVERIQAQHAMAQILTPEQKATL KQMREERQAKFKNKAKGEHKGQTTQ >Mature_185_residues MKKFVLGSVLALSGSLAMVGCTQASAVSESQANPATQMQHKQGGHGQYKGHKGGHEMGRMGKKGAGFEKLNLTEQQKAQM QALRKAQMEKRQGERAQRQAQMQQTRAQTEALINSPTINATALNTLADRQAAIAKQQFVERIQAQHAMAQILTPEQKATL KQMREERQAKFKNKAKGEHKGQTTQ
Specific function: Unknown
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20365; Mature: 20365
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFVLGSVLALSGSLAMVGCTQASAVSESQANPATQMQHKQGGHGQYKGHKGGHEMGRM CCCHHHHHHHHHCCCHHEEECCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHC GKKGAGFEKLNLTEQQKAQMQALRKAQMEKRQGERAQRQAQMQQTRAQTEALINSPTINA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TALNTLADRQAAIAKQQFVERIQAQHAMAQILTPEQKATLKQMREERQAKFKNKAKGEHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC GQTTQ CCCCC >Mature Secondary Structure MKKFVLGSVLALSGSLAMVGCTQASAVSESQANPATQMQHKQGGHGQYKGHKGGHEMGRM CCCHHHHHHHHHCCCHHEEECCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHC GKKGAGFEKLNLTEQQKAQMQALRKAQMEKRQGERAQRQAQMQQTRAQTEALINSPTINA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TALNTLADRQAAIAKQQFVERIQAQHAMAQILTPEQKATLKQMREERQAKFKNKAKGEHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC GQTTQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA