Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652107
Identifier: 148652107
GI number: 148652107
Start: 350161
End: 350988
Strand: Direct
Name: 148652107
Synonym: PsycPRwf_0295
Alternate gene names: NA
Gene position: 350161-350988 (Clockwise)
Preceding gene: 148652106
Following gene: 148652108
Centisome position: 11.75
GC content: 48.79
Gene sequence:
>828_bases ATGTTAGCAAAAAAACCTAAAGGCGCAGTACAAAAGCGACAAGGCGGTGGGGTTGCAAGCTTACTGTGGATGTTCGTTGG CGCCATATTGACTGTTATGTGTTTGGGTGTGCTGTATCTTTGGAACCCGTTTGACTTAGGTAGCGAGACCAAAGCGGAGC AAAAAACCGTTGAGCCGATCAATCAGCCTAAGTCTGAGACCAATGACTTTGAGTTTTATGATTTGCTGCCCGATCAAGAG ATGATCAGCGTGCCAGATGAAGCGGTGTTTGATCAAGATACGCAGACCACGACTGCCCCAGATGTGTTACAACCTGATGT GGTGGTAACCACGCCAAGTACCCAAACTCGTGATAATAGCACTCAATCTATTGATGATTTGGCCGGAGTACAAGACAACT CTACTCAGACACCGGTAAAACCAAATGCGCCGGCAGCCAGTGGGGATAATGACATTGTGATTGTGGAGGAGGAGGGGACT TATGATGACCCTACGCCGGCCACCAGTAGTGGCAACCAAACCAGTCAGAGCACAGGCCAAGCCAACCGAGTGACTCAAGC TGGAGTTAAGCCTGCTGCTGCTAGCAGAGCACCGAGTTATATTCTGCAAATTAACAGCTTTAGTAGTGCTGATGAAGCAG ATAAACGCCGCGCCCAAGTGCTGATGGCAGGCGTAGATGCCAAAGTGGTTAAAAGCAAAATGAACAATGGTCAGGTGTTT TACCAAGTGGTGTCACCCACCATGACCAGCCGTCAAAATGTCGTGGCCGCGCAGCAAAAACTACAAAATAATGGCATTGA CTCGTTAATTGTTGAGCAGCGCCGCTGA
Upstream 100 bases:
>100_bases TATAAGTTATTTGATATACTCGCTCATGTTAGTGACTTAATGGTTAACTTATAAATTGCCAACGAGCATGGCCTGACTGA TTCATAAATGGAGAAAATTT
Downstream 100 bases:
>100_bases GTCGTCTCTAAGCCAATGAGAGACACTAAGTAAGCCCGTTAGTTTTTATATTCAAAGGTATTTCTTACATTTAAAGGTAT ATGGATCATGCCCAAAGTCT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLAKKPKGAVQKRQGGGVASLLWMFVGAILTVMCLGVLYLWNPFDLGSETKAEQKTVEPINQPKSETNDFEFYDLLPDQE MISVPDEAVFDQDTQTTTAPDVLQPDVVVTTPSTQTRDNSTQSIDDLAGVQDNSTQTPVKPNAPAASGDNDIVIVEEEGT YDDPTPATSSGNQTSQSTGQANRVTQAGVKPAAASRAPSYILQINSFSSADEADKRRAQVLMAGVDAKVVKSKMNNGQVF YQVVSPTMTSRQNVVAAQQKLQNNGIDSLIVEQRR
Sequences:
>Translated_275_residues MLAKKPKGAVQKRQGGGVASLLWMFVGAILTVMCLGVLYLWNPFDLGSETKAEQKTVEPINQPKSETNDFEFYDLLPDQE MISVPDEAVFDQDTQTTTAPDVLQPDVVVTTPSTQTRDNSTQSIDDLAGVQDNSTQTPVKPNAPAASGDNDIVIVEEEGT YDDPTPATSSGNQTSQSTGQANRVTQAGVKPAAASRAPSYILQINSFSSADEADKRRAQVLMAGVDAKVVKSKMNNGQVF YQVVSPTMTSRQNVVAAQQKLQNNGIDSLIVEQRR >Mature_275_residues MLAKKPKGAVQKRQGGGVASLLWMFVGAILTVMCLGVLYLWNPFDLGSETKAEQKTVEPINQPKSETNDFEFYDLLPDQE MISVPDEAVFDQDTQTTTAPDVLQPDVVVTTPSTQTRDNSTQSIDDLAGVQDNSTQTPVKPNAPAASGDNDIVIVEEEGT YDDPTPATSSGNQTSQSTGQANRVTQAGVKPAAASRAPSYILQINSFSSADEADKRRAQVLMAGVDAKVVKSKMNNGQVF YQVVSPTMTSRQNVVAAQQKLQNNGIDSLIVEQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29639; Mature: 29639
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKKPKGAVQKRQGGGVASLLWMFVGAILTVMCLGVLYLWNPFDLGSETKAEQKTVEPI CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NQPKSETNDFEFYDLLPDQEMISVPDEAVFDQDTQTTTAPDVLQPDVVVTTPSTQTRDNS CCCCCCCCCEEEEECCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC TQSIDDLAGVQDNSTQTPVKPNAPAASGDNDIVIVEEEGTYDDPTPATSSGNQTSQSTGQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCC ANRVTQAGVKPAAASRAPSYILQINSFSSADEADKRRAQVLMAGVDAKVVKSKMNNGQVF HHHHHHHCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEE YQVVSPTMTSRQNVVAAQQKLQNNGIDSLIVEQRR EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MLAKKPKGAVQKRQGGGVASLLWMFVGAILTVMCLGVLYLWNPFDLGSETKAEQKTVEPI CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NQPKSETNDFEFYDLLPDQEMISVPDEAVFDQDTQTTTAPDVLQPDVVVTTPSTQTRDNS CCCCCCCCCEEEEECCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC TQSIDDLAGVQDNSTQTPVKPNAPAASGDNDIVIVEEEGTYDDPTPATSSGNQTSQSTGQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCC ANRVTQAGVKPAAASRAPSYILQINSFSSADEADKRRAQVLMAGVDAKVVKSKMNNGQVF HHHHHHHCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEE YQVVSPTMTSRQNVVAAQQKLQNNGIDSLIVEQRR EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA