Click here to switch to the map view.

The map label for this gene is rlmA [H]

Identifier: 148651955

GI number: 148651955

Start: 167017

End: 167979

Strand: Direct

Name: rlmA [H]

Synonym: PsycPRwf_0138

Alternate gene names: 148651955

Gene position: 167017-167979 (Clockwise)

Preceding gene: 148651954

Following gene: 148651963

Centisome position: 5.61

GC content: 49.53

Gene sequence:

>963_bases
ATGATCTCTAAACCCTCAGCACGTTATCAACCGCAGTTTTTGTGTCCTTATTGCCAGTCACCTTTGCTAATCAATGCCAA
GACTTGGCTGTGTGATGGCAGTCAAAATGAAAAAGGGACCCGTCATCCCTTTGATGTGGCGCGCCAAGGCTACGTGAATT
TATTACCTGTGCAAAATAAAAAATCCAAAGATCCCGGTGATAGCCAACAGTCGATTGACGCTCGCCACCGATTTTTAAAC
CAAGGCTTTTATCAGCCTTTGCAGCAGCTTATTGCCAGTTTGGTCATGCCCAGCTTAGAAGCTTCAGCGCCACCGGTTCA
AGCAAAGGCAAAGACTTGGCTCGATGTGGGCTGCGGAGAGGGCTATTACACCGGTGCTATTGCTGCGGCTCTAGCGGCAA
CACCAAATAATCACGCTTGCTTGGTAGCACTAGATATCAGCAAACCGGCGGTCGCCACAACGGCCAGAGTCGCCAAACAA
CACTCTGGGCTGTGGTATCAGGTTGAGGCAGATGGTTTGAGCGCCACTGCTATGTATCCGATGGTGGCCAGCGCCTCGCA
TTTGCCGCTAGCCGATGCCAGCTTAGATGCCATCAGTACTATTTTTAGCCCGATATTACCGGAGGAATTTGCGCGTGTCT
TAACCTTAGGCGGACGGCTGATTATTGCCAAACCTGATGCTGGGCATTTACAAAGTATGCGCGAGGCCTTGTTTGATGAG
GTACGCCCGCATGATTCAGATAAGTTCTTAGAGGAGCTGTTGCCGTACTTTAAAGAAGTGGCAACGCATACTGTGGCGGC
TGATTTGATATTAGATGCTCAGGCTTTGGCAGATTTATTGACCATGACCCCGTATTCATATCGGGCACGTGCTGGGAAGC
GAGAGGCGTTATTGGCTTCTGCTGAGCGTCAGCCATTTGAGACTACCGCTCGCTTTGTGGTGTATGAATTGGTAAAAATT
TAG

Upstream 100 bases:

>100_bases
CATGTACAGCAGTTAATAACGGGTGTCATATTGGCACCCGTTTTGTTTTACTTTAAATTATATCTGGTTACTTTCAGACT
TGGTAATAGGATTTTGACTT

Downstream 100 bases:

>100_bases
GCGGTTATTCAAAGTTAACGCTGGGTCTGTCTAAGCAGTAGGTATCAACTTAAGACGCAGGGGTATACATCTACCGCTAC
GGCTTAGCAAACACAATCAA

Product: rRNA (guanine-N(1)-)-methyltransferase

Products: NA

Alternate protein names: 23S rRNA m1G745 methyltransferase; rRNA (guanine-N(1)-)-methyltransferase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MISKPSARYQPQFLCPYCQSPLLINAKTWLCDGSQNEKGTRHPFDVARQGYVNLLPVQNKKSKDPGDSQQSIDARHRFLN
QGFYQPLQQLIASLVMPSLEASAPPVQAKAKTWLDVGCGEGYYTGAIAAALAATPNNHACLVALDISKPAVATTARVAKQ
HSGLWYQVEADGLSATAMYPMVASASHLPLADASLDAISTIFSPILPEEFARVLTLGGRLIIAKPDAGHLQSMREALFDE
VRPHDSDKFLEELLPYFKEVATHTVAADLILDAQALADLLTMTPYSYRARAGKREALLASAERQPFETTARFVVYELVKI

Sequences:

>Translated_320_residues
MISKPSARYQPQFLCPYCQSPLLINAKTWLCDGSQNEKGTRHPFDVARQGYVNLLPVQNKKSKDPGDSQQSIDARHRFLN
QGFYQPLQQLIASLVMPSLEASAPPVQAKAKTWLDVGCGEGYYTGAIAAALAATPNNHACLVALDISKPAVATTARVAKQ
HSGLWYQVEADGLSATAMYPMVASASHLPLADASLDAISTIFSPILPEEFARVLTLGGRLIIAKPDAGHLQSMREALFDE
VRPHDSDKFLEELLPYFKEVATHTVAADLILDAQALADLLTMTPYSYRARAGKREALLASAERQPFETTARFVVYELVKI
>Mature_320_residues
MISKPSARYQPQFLCPYCQSPLLINAKTWLCDGSQNEKGTRHPFDVARQGYVNLLPVQNKKSKDPGDSQQSIDARHRFLN
QGFYQPLQQLIASLVMPSLEASAPPVQAKAKTWLDVGCGEGYYTGAIAAALAATPNNHACLVALDISKPAVATTARVAKQ
HSGLWYQVEADGLSATAMYPMVASASHLPLADASLDAISTIFSPILPEEFARVLTLGGRLIIAKPDAGHLQSMREALFDE
VRPHDSDKFLEELLPYFKEVATHTVAADLILDAQALADLLTMTPYSYRARAGKREALLASAERQPFETTARFVVYELVKI

Specific function: Specifically methylates the guanosine in position 745 of 23S rRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RlmA family [H]

Homologues:

Organism=Escherichia coli, GI1788125, Length=303, Percent_Identity=34.6534653465347, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016718 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.187 [H]

Molecular weight: Translated: 34984; Mature: 34984

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKPSARYQPQFLCPYCQSPLLINAKTWLCDGSQNEKGTRHPFDVARQGYVNLLPVQNK
CCCCCCCCCCCCEECHHCCCCEEEECEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCC
KSKDPGDSQQSIDARHRFLNQGFYQPLQQLIASLVMPSLEASAPPVQAKAKTWLDVGCGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCC
GYYTGAIAAALAATPNNHACLVALDISKPAVATTARVAKQHSGLWYQVEADGLSATAMYP
CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
MVASASHLPLADASLDAISTIFSPILPEEFARVLTLGGRLIIAKPDAGHLQSMREALFDE
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH
VRPHDSDKFLEELLPYFKEVATHTVAADLILDAQALADLLTMTPYSYRARAGKREALLAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
AERQPFETTARFVVYELVKI
HCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MISKPSARYQPQFLCPYCQSPLLINAKTWLCDGSQNEKGTRHPFDVARQGYVNLLPVQNK
CCCCCCCCCCCCEECHHCCCCEEEECEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCC
KSKDPGDSQQSIDARHRFLNQGFYQPLQQLIASLVMPSLEASAPPVQAKAKTWLDVGCGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCC
GYYTGAIAAALAATPNNHACLVALDISKPAVATTARVAKQHSGLWYQVEADGLSATAMYP
CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
MVASASHLPLADASLDAISTIFSPILPEEFARVLTLGGRLIIAKPDAGHLQSMREALFDE
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH
VRPHDSDKFLEELLPYFKEVATHTVAADLILDAQALADLLTMTPYSYRARAGKREALLAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
AERQPFETTARFVVYELVKI
HCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7984109; 9097040; 9278503; 9440525 [H]