Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148651901
Identifier: 148651901
GI number: 148651901
Start: 102631
End: 103830
Strand: Direct
Name: 148651901
Synonym: PsycPRwf_0084
Alternate gene names: NA
Gene position: 102631-103830 (Clockwise)
Preceding gene: 148651900
Following gene: 148651902
Centisome position: 3.45
GC content: 49.0
Gene sequence:
>1200_bases ATGGATTTACACAAAACAACGCCGCCATCAGACATTACTTCGTATTGTGGCAGCTATCTGCCAAGCGATGTGACTTTGTT ATTAGACATTGTTGATAAGTCGGGTGTTAGGGATGTACCGGTGGCACAAAAAGAGGCGCTGATTCAAAGCGGACAGCAGC ATTACTCAGACATGCTGACTTTAGAAAAAGCGCCTTCTGACGCCCATGAGCAGATGTATCAACAGGCGTTACAGCAAGGA AAGTTACGCTTGGCGCAGGATATTATTCGGCTTAGCACCACTTTAAAAAGCTTGTTTGAGACGCAGACAAATAGCCGGTC TCCACTGATTTTGGTGAGTTTGGTGCGGGCAGGATTGCCGATAGGGGTTTTGCTACAGCGGGCTTTAAGCGATGGTAGCG CACCTTATCATTTGCCCAGTCAGCATTATGGCGTCAGTATCATCCGTGATAGAGGGCTAGATCCGGTGGCCGTCACCAAA ATCTTGAGCGCTCACCCCACAAGTCCAATAGTCTTCGTCGATGGCTGGACCGGTAAAGGGGCCATTTATGGTGAGCTGTC ACGCAGCTTAAAGGCTTATTTGGATAAGCATTGGACGGCAGATGCAAGCTTTAGCAATGTGTTTCATCAAGGCCGTGGAG TGGTTCCCTTGTTAACCCTTGCTGACCCTGCGGGCGTGGCGTGGTTATCGGCCAGTAATGAGGATTGGCTGATACCTTCA GGTCTGCTTGGCAGTACCGTCTCTGGCCTGATATCACGAACCTTGTATAGCGCCCCCAATCACGACTTAACATCCGGCTT ACATCAAAGCGTGATTTATCATGATTTGGCGCATAAAGATCACAGTTTAAGCTTTATCGAGGCCATAGAAGACATGCGCC ATCAGCTGCTTTTGCAAAATGCCAACACAACCGCTTTGCCGACTTATGCAGCCCCGCGTTATCATGCGCAGCGTATTATT GAGACGTTGGCCAATCACTATCAGATTAGTAACATCAATCGTATTAAGCCGACCATTGCTGAGGCTACCCGAGCCGTGAT GCGGCGTGATCCTGAGCAAGTGTTATTGGCCAGTGCCGATCATCCTGACACGGCATTATTAAGGCATTTGTGTCAACAAA AGGGGGTGGCTGTGACGGTGATTGGCGAGCAGATTTTGCCGTATCAAGCGGTGACCATCATCAAAAAACGTGACCAATAG
Upstream 100 bases:
>100_bases CTACCCTCGCTAACACATCGCCTTGTTTAAACATACTTTTTAAATATAACCGTTTTTAAATATAACCATTTTTAAATATA AAAGATAAAGCAGCTAAGCT
Downstream 100 bases:
>100_bases CCCTGCTACATATCAAAAAAAACCAAATCCTATCGCATAAGCTTTATATCTAATCGCAGTTTTTCTAATCTTAGAGTGTA TATCATGACCCCGTTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDLHKTTPPSDITSYCGSYLPSDVTLLLDIVDKSGVRDVPVAQKEALIQSGQQHYSDMLTLEKAPSDAHEQMYQQALQQG KLRLAQDIIRLSTTLKSLFETQTNSRSPLILVSLVRAGLPIGVLLQRALSDGSAPYHLPSQHYGVSIIRDRGLDPVAVTK ILSAHPTSPIVFVDGWTGKGAIYGELSRSLKAYLDKHWTADASFSNVFHQGRGVVPLLTLADPAGVAWLSASNEDWLIPS GLLGSTVSGLISRTLYSAPNHDLTSGLHQSVIYHDLAHKDHSLSFIEAIEDMRHQLLLQNANTTALPTYAAPRYHAQRII ETLANHYQISNINRIKPTIAEATRAVMRRDPEQVLLASADHPDTALLRHLCQQKGVAVTVIGEQILPYQAVTIIKKRDQ
Sequences:
>Translated_399_residues MDLHKTTPPSDITSYCGSYLPSDVTLLLDIVDKSGVRDVPVAQKEALIQSGQQHYSDMLTLEKAPSDAHEQMYQQALQQG KLRLAQDIIRLSTTLKSLFETQTNSRSPLILVSLVRAGLPIGVLLQRALSDGSAPYHLPSQHYGVSIIRDRGLDPVAVTK ILSAHPTSPIVFVDGWTGKGAIYGELSRSLKAYLDKHWTADASFSNVFHQGRGVVPLLTLADPAGVAWLSASNEDWLIPS GLLGSTVSGLISRTLYSAPNHDLTSGLHQSVIYHDLAHKDHSLSFIEAIEDMRHQLLLQNANTTALPTYAAPRYHAQRII ETLANHYQISNINRIKPTIAEATRAVMRRDPEQVLLASADHPDTALLRHLCQQKGVAVTVIGEQILPYQAVTIIKKRDQ >Mature_399_residues MDLHKTTPPSDITSYCGSYLPSDVTLLLDIVDKSGVRDVPVAQKEALIQSGQQHYSDMLTLEKAPSDAHEQMYQQALQQG KLRLAQDIIRLSTTLKSLFETQTNSRSPLILVSLVRAGLPIGVLLQRALSDGSAPYHLPSQHYGVSIIRDRGLDPVAVTK ILSAHPTSPIVFVDGWTGKGAIYGELSRSLKAYLDKHWTADASFSNVFHQGRGVVPLLTLADPAGVAWLSASNEDWLIPS GLLGSTVSGLISRTLYSAPNHDLTSGLHQSVIYHDLAHKDHSLSFIEAIEDMRHQLLLQNANTTALPTYAAPRYHAQRII ETLANHYQISNINRIKPTIAEATRAVMRRDPEQVLLASADHPDTALLRHLCQQKGVAVTVIGEQILPYQAVTIIKKRDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43837; Mature: 43837
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLHKTTPPSDITSYCGSYLPSDVTLLLDIVDKSGVRDVPVAQKEALIQSGQQHYSDMLT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LEKAPSDAHEQMYQQALQQGKLRLAQDIIRLSTTLKSLFETQTNSRSPLILVSLVRAGLP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC IGVLLQRALSDGSAPYHLPSQHYGVSIIRDRGLDPVAVTKILSAHPTSPIVFVDGWTGKG HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC AIYGELSRSLKAYLDKHWTADASFSNVFHQGRGVVPLLTLADPAGVAWLSASNEDWLIPS CHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCC GLLGSTVSGLISRTLYSAPNHDLTSGLHQSVIYHDLAHKDHSLSFIEAIEDMRHQLLLQN CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC ANTTALPTYAAPRYHAQRIIETLANHYQISNINRIKPTIAEATRAVMRRDPEQVLLASAD CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCHHHHEEECCC HPDTALLRHLCQQKGVAVTVIGEQILPYQAVTIIKKRDQ CCHHHHHHHHHHHCCCEEEEECCHHCCHHHHHHHHCCCC >Mature Secondary Structure MDLHKTTPPSDITSYCGSYLPSDVTLLLDIVDKSGVRDVPVAQKEALIQSGQQHYSDMLT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LEKAPSDAHEQMYQQALQQGKLRLAQDIIRLSTTLKSLFETQTNSRSPLILVSLVRAGLP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC IGVLLQRALSDGSAPYHLPSQHYGVSIIRDRGLDPVAVTKILSAHPTSPIVFVDGWTGKG HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC AIYGELSRSLKAYLDKHWTADASFSNVFHQGRGVVPLLTLADPAGVAWLSASNEDWLIPS CHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCC GLLGSTVSGLISRTLYSAPNHDLTSGLHQSVIYHDLAHKDHSLSFIEAIEDMRHQLLLQN CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC ANTTALPTYAAPRYHAQRIIETLANHYQISNINRIKPTIAEATRAVMRRDPEQVLLASAD CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCHHHHEEECCC HPDTALLRHLCQQKGVAVTVIGEQILPYQAVTIIKKRDQ CCHHHHHHHHHHHCCCEEEEECCHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA