Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is hisH [H]
Identifier: 148651878
GI number: 148651878
Start: 74243
End: 74878
Strand: Direct
Name: hisH [H]
Synonym: PsycPRwf_0061
Alternate gene names: 148651878
Gene position: 74243-74878 (Clockwise)
Preceding gene: 148651877
Following gene: 148651879
Centisome position: 2.49
GC content: 48.27
Gene sequence:
>636_bases ATGACCAAAATTGCATTGTTAGACTATGGCATGGGCAACCTCCACTCTGCCAGCAAAGCGTTGGCTGCGGTGGGGGCTGA GGTATCTATTACCAATGATCCAAACATCATCCGTGCAGCAGACAAAATCGTCTTTCCAGGCGTGGGGGCAATGCGCGACT GTATGGCACAGATGCGTGAGCAAGGGATTGATGAGGTGGTCAAAGAAGCGGCCTTTAATAAGCCGGTGATGGCAATTTGT GTCGGCATGCAAGCGCTGTTTACGGAGTCGCTTGAGTTTGAACATACCGAGTGTTTGGATATCCTGCAAGGTCAGGTAAA ACAGTTTGACCCTAGCTGGATTGACCCTAAAGGCGAGACCATTAAGATTCCTCATATGGGCTGGAATACCATTGAGGGCA TGGATTTGAGTCATCCGCTGTGGCAAGGTATTGATGAGCATGCGCATTTTTATTTCGTACACAGCTATTACTGCGCCCCA GAAGATAACTCTGTGGTGGCGGCGGTGTGTGATTACGGTCAGCCGTTTTGTGCCAGCGTGTTAAAAGACAATCTGTTTGC GACCCAGTTTCACCCAGAAAAAAGCCACAATGATGGGCTACAACTGCTAAAAAACTTCGTTGAATGGAACATCTAA
Upstream 100 bases:
>100_bases TGTACTTTTAAGGCCTTTGCTCGTGCGCTGCGTATGGCTTGTGAGTATGATGAGCGTGCGCTAAACACGCTACCTTCTAC CAAAGAGGCATTGTAACTAT
Downstream 100 bases:
>100_bases CCGAACTGGCAACATGACAATCCCAATAACAATTCCAATAACAAGGCCAATAGCAATCAGGCTCGCAGCTAAAAAGACAG CAGCTAAAAAAACAGCCACA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTKIALLDYGMGNLHSASKALAAVGAEVSITNDPNIIRAADKIVFPGVGAMRDCMAQMREQGIDEVVKEAAFNKPVMAIC VGMQALFTESLEFEHTECLDILQGQVKQFDPSWIDPKGETIKIPHMGWNTIEGMDLSHPLWQGIDEHAHFYFVHSYYCAP EDNSVVAAVCDYGQPFCASVLKDNLFATQFHPEKSHNDGLQLLKNFVEWNI
Sequences:
>Translated_211_residues MTKIALLDYGMGNLHSASKALAAVGAEVSITNDPNIIRAADKIVFPGVGAMRDCMAQMREQGIDEVVKEAAFNKPVMAIC VGMQALFTESLEFEHTECLDILQGQVKQFDPSWIDPKGETIKIPHMGWNTIEGMDLSHPLWQGIDEHAHFYFVHSYYCAP EDNSVVAAVCDYGQPFCASVLKDNLFATQFHPEKSHNDGLQLLKNFVEWNI >Mature_210_residues TKIALLDYGMGNLHSASKALAAVGAEVSITNDPNIIRAADKIVFPGVGAMRDCMAQMREQGIDEVVKEAAFNKPVMAICV GMQALFTESLEFEHTECLDILQGQVKQFDPSWIDPKGETIKIPHMGWNTIEGMDLSHPLWQGIDEHAHFYFVHSYYCAPE DNSVVAAVCDYGQPFCASVLKDNLFATQFHPEKSHNDGLQLLKNFVEWNI
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=205, Percent_Identity=40.9756097560976, Blast_Score=150, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6319725, Length=220, Percent_Identity=32.2727272727273, Blast_Score=113, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 23490; Mature: 23359
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIALLDYGMGNLHSASKALAAVGAEVSITNDPNIIRAADKIVFPGVGAMRDCMAQMRE CCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCEEEHHHHEECCCCCHHHHHHHHHHH QGIDEVVKEAAFNKPVMAICVGMQALFTESLEFEHTECLDILQGQVKQFDPSWIDPKGET CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE IKIPHMGWNTIEGMDLSHPLWQGIDEHAHFYFVHSYYCAPEDNSVVAAVCDYGQPFCASV EEECCCCCCCCCCCCCCCHHHHCHHHCCEEEEEEEEEECCCCCCEEEEEECCCCHHHHHH LKDNLFATQFHPEKSHNDGLQLLKNFVEWNI HHCCCEEEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TKIALLDYGMGNLHSASKALAAVGAEVSITNDPNIIRAADKIVFPGVGAMRDCMAQMRE CEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCEEEHHHHEECCCCCHHHHHHHHHHH QGIDEVVKEAAFNKPVMAICVGMQALFTESLEFEHTECLDILQGQVKQFDPSWIDPKGET CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE IKIPHMGWNTIEGMDLSHPLWQGIDEHAHFYFVHSYYCAPEDNSVVAAVCDYGQPFCASV EEECCCCCCCCCCCCCCCHHHHCHHHCCEEEEEEEEEECCCCCCEEEEEECCCCHHHHHH LKDNLFATQFHPEKSHNDGLQLLKNFVEWNI HHCCCEEEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA