Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is hisB
Identifier: 148651877
GI number: 148651877
Start: 73612
End: 74238
Strand: Direct
Name: hisB
Synonym: PsycPRwf_0060
Alternate gene names: 148651877
Gene position: 73612-74238 (Clockwise)
Preceding gene: 148651872
Following gene: 148651878
Centisome position: 2.47
GC content: 46.25
Gene sequence:
>627_bases ATGACTACTGAAATCCACTCAAACCCAGCCAACCGTCCGAATCGTATAGCCAGTGTTGAGCGTAATACCGCTGAGACTCA AGTCAGCGTCACTGTCAATCTTGATGGGACAGGCCAAGGTAAAATCGATACTGGTGTGCCATTTTTGGACCATATGCTAG ACCAAATCAAGCGTCATGGTCTATTTGACTTAGACATCACCTGTAAAGGCGATACTTACATTGATGATCACCACAGCATC GAGGACACCGGCATTACTTTGGGTCAAGCTTTTGCCAAAGCGTTGGGCGACAAAAAGGGCATTCGTCGTTATGGCCACTT TTATGCGCCATTAGATGAGTCACTAACCCGTGCGGTGGTAGATATTTCTGGTCGTCCAGGGCTGCACATGGACATTCCTT TTACCCGCTCGCACGTTGGTAATTTTGATGTGGATTTATTCAGCGAATTCTTTTTTGGCTTTGTTAACCATGCGTGGATG ACAGTGCACTTAGACAACCTTAAGGGTAAAAATAGCCATCACCAGATTGAGTGTACTTTTAAGGCCTTTGCTCGTGCGCT GCGTATGGCTTGTGAGTATGATGAGCGTGCGCTAAACACGCTACCTTCTACCAAAGAGGCATTGTAA
Upstream 100 bases:
>100_bases TTAAAGGTAAGGCGTTTGCTATCATCAAGATATCCTATATTCCCTGACGCTATTTGGCGACTGTTTCTTCGTTATTATTT TATTAGTGAGCCTATTTGCC
Downstream 100 bases:
>100_bases CTATATGACCAAAATTGCATTGTTAGACTATGGCATGGGCAACCTCCACTCTGCCAGCAAAGCGTTGGCTGCGGTGGGGG CTGAGGTATCTATTACCAAT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTTEIHSNPANRPNRIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHGLFDLDITCKGDTYIDDHHSI EDTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVVDISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWM TVHLDNLKGKNSHHQIECTFKAFARALRMACEYDERALNTLPSTKEAL
Sequences:
>Translated_208_residues MTTEIHSNPANRPNRIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHGLFDLDITCKGDTYIDDHHSI EDTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVVDISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWM TVHLDNLKGKNSHHQIECTFKAFARALRMACEYDERALNTLPSTKEAL >Mature_207_residues TTEIHSNPANRPNRIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHGLFDLDITCKGDTYIDDHHSIE DTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVVDISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWMT VHLDNLKGKNSHHQIECTFKAFARALRMACEYDERALNTLPSTKEAL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=198, Percent_Identity=50.5050505050505, Blast_Score=186, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=38.4259259259259, Blast_Score=155, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PSYWF (A5WBH9)
Other databases:
- EMBL: CP000713 - RefSeq: YP_001278970.1 - ProteinModelPortal: A5WBH9 - SMR: A5WBH9 - STRING: A5WBH9 - GeneID: 5205115 - GenomeReviews: CP000713_GR - KEGG: prw:PsycPRwf_0060 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: PRK00951 - BioCyc: PSP56811:PSYCPRWF_0060-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 23302; Mature: 23171
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIHSNPANRPNRIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHG CCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC LFDLDITCKGDTYIDDHHSIEDTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVV CEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH DISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWMTVHLDNLKGKNSHHQIECTF CCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEHH KAFARALRMACEYDERALNTLPSTKEAL HHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure TTEIHSNPANRPNRIASVERNTAETQVSVTVNLDGTGQGKIDTGVPFLDHMLDQIKRHG CCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC LFDLDITCKGDTYIDDHHSIEDTGITLGQAFAKALGDKKGIRRYGHFYAPLDESLTRAVV CEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH DISGRPGLHMDIPFTRSHVGNFDVDLFSEFFFGFVNHAWMTVHLDNLKGKNSHHQIECTF CCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEHH KAFARALRMACEYDERALNTLPSTKEAL HHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA