Click here to switch to the map view.

The map label for this gene is cbpA [H]

Identifier: 148651866

GI number: 148651866

Start: 61767

End: 62786

Strand: Direct

Name: cbpA [H]

Synonym: PsycPRwf_0049

Alternate gene names: 148651866

Gene position: 61767-62786 (Clockwise)

Preceding gene: 148651865

Following gene: 148651867

Centisome position: 2.07

GC content: 47.84

Gene sequence:

>1020_bases
ATGGCAGAAAAAAGTTTTTATGAGGTTTTGGGTGTCAGCAAAGACGCCTCAGAACAAGATATTAAAAAGGCTTATCGTAA
ATTGGTTCGCAAATATCATCCGGATGTCAGTGATGCCAAAGATGCCGATGAAAAAATTGCAGAAATCAATAATGCCTATG
AGACTTTAAGAGATAAAGAAAAACGAGCCCAGTACGATGCGATGCAGGCCAATCCCTTTGCAGGTGCAGGCTTTGGCAGC
GGTGCAGGATTTGGGAGCGGTGGCTCTGGAGCACAAGGTGGCTTTAGATGGGAGGACATCAAAGATCAGTTCGGGGAAGG
GGCGCCATTCGGCAGTGGTAGCTTCCGCTTCGATGATATTTTTTCAGCATTTGGTGCCGGTAGGGGTGGTGCTCAGTCCT
CTCGTCAATCTGGCTTTGAGGGCTATGACCACTTTGGCAGTGGCTTTAAAGATGCAGGCCCAGCGCCCGGTCAAGACCAA
CACGCTGAGATTAATGTCAGCTTAGACTCGGTATACAGCGGCGATGACTATAGCATTAAATTAAATGTACCCAGTCGCCA
GCCCAATGGCAGTGTCATTCAAGAACAAAAAACCCTAAAAATTAAGATTCCTAAGGGCATCACTGAAGGTAAGCAAATTC
GCTTAAGTGGCCAGGGCGCGGCAAGCTATGGCGGCGGTAAAAATGGCGACTTGTTCTTAAAAGTAAAAATCACCCACGAT
GCCAATATTCGCCTAGAAGGCGCGGATGTGTATCAAACCGTGAATATTACCCCTTGGGAGGCTGCGCTGGGCGAGAAGAT
TAATATCAGTACCCCCGCGGGCACACTTGGGGTGACCATTCCCAAAAACAGTAAGTCGGGCAGCAACTTACGAGTGAAAG
GTAAAGGCATTCCCGCCAAGCAAGCTGGGGATTTATATTTGACCTTAAATATTGTTAATCCTGAGCTGACCACTGAGGCC
CAAAAGGAGGCATTCGCTGCGCTAAAAGCCAGCTTTGCTGAGGCTGAAATAAAGCGTTGA

Upstream 100 bases:

>100_bases
CAAAAAAGTATCAATAAGCAACGGTGAAATATGAGTTAATAACCCTTATATATACCGATATAAAGCAACTCTTTAGACCG
CTTAAATAAGGATAATAACA

Downstream 100 bases:

>100_bases
TAGCGCCAATAAAAATATAAGCATAAGAGGAGAGTTATCATGCAACACTCTAGTGAATTCAACGATATTATTATGAGCCT
AGATGAGCTCATTGCCGCTT

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAEKSFYEVLGVSKDASEQDIKKAYRKLVRKYHPDVSDAKDADEKIAEINNAYETLRDKEKRAQYDAMQANPFAGAGFGS
GAGFGSGGSGAQGGFRWEDIKDQFGEGAPFGSGSFRFDDIFSAFGAGRGGAQSSRQSGFEGYDHFGSGFKDAGPAPGQDQ
HAEINVSLDSVYSGDDYSIKLNVPSRQPNGSVIQEQKTLKIKIPKGITEGKQIRLSGQGAASYGGGKNGDLFLKVKITHD
ANIRLEGADVYQTVNITPWEAALGEKINISTPAGTLGVTIPKNSKSGSNLRVKGKGIPAKQAGDLYLTLNIVNPELTTEA
QKEAFAALKASFAEAEIKR

Sequences:

>Translated_339_residues
MAEKSFYEVLGVSKDASEQDIKKAYRKLVRKYHPDVSDAKDADEKIAEINNAYETLRDKEKRAQYDAMQANPFAGAGFGS
GAGFGSGGSGAQGGFRWEDIKDQFGEGAPFGSGSFRFDDIFSAFGAGRGGAQSSRQSGFEGYDHFGSGFKDAGPAPGQDQ
HAEINVSLDSVYSGDDYSIKLNVPSRQPNGSVIQEQKTLKIKIPKGITEGKQIRLSGQGAASYGGGKNGDLFLKVKITHD
ANIRLEGADVYQTVNITPWEAALGEKINISTPAGTLGVTIPKNSKSGSNLRVKGKGIPAKQAGDLYLTLNIVNPELTTEA
QKEAFAALKASFAEAEIKR
>Mature_338_residues
AEKSFYEVLGVSKDASEQDIKKAYRKLVRKYHPDVSDAKDADEKIAEINNAYETLRDKEKRAQYDAMQANPFAGAGFGSG
AGFGSGGSGAQGGFRWEDIKDQFGEGAPFGSGSFRFDDIFSAFGAGRGGAQSSRQSGFEGYDHFGSGFKDAGPAPGQDQH
AEINVSLDSVYSGDDYSIKLNVPSRQPNGSVIQEQKTLKIKIPKGITEGKQIRLSGQGAASYGGGKNGDLFLKVKITHDA
NIRLEGADVYQTVNITPWEAALGEKINISTPAGTLGVTIPKNSKSGSNLRVKGKGIPAKQAGDLYLTLNIVNPELTTEAQ
KEAFAALKASFAEAEIKR

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=340, Percent_Identity=31.4705882352941, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI205360838, Length=375, Percent_Identity=28, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI205360840, Length=375, Percent_Identity=28, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI56549115, Length=349, Percent_Identity=29.2263610315186, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI201862518, Length=349, Percent_Identity=29.2263610315186, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI201862587, Length=347, Percent_Identity=29.3948126801153, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI5453690, Length=359, Percent_Identity=25.6267409470752, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI7706495, Length=374, Percent_Identity=26.4705882352941, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI9558755, Length=126, Percent_Identity=41.2698412698413, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI72534740, Length=149, Percent_Identity=37.5838926174497, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI4504511, Length=285, Percent_Identity=27.719298245614, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI27151736, Length=121, Percent_Identity=43.801652892562, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI88501736, Length=121, Percent_Identity=43.801652892562, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI194306642, Length=121, Percent_Identity=38.0165289256198, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI194306640, Length=121, Percent_Identity=38.0165289256198, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI56687498, Length=60, Percent_Identity=53.3333333333333, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI39204547, Length=337, Percent_Identity=26.1127596439169, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI22749377, Length=63, Percent_Identity=47.6190476190476, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI17388799, Length=63, Percent_Identity=50.7936507936508, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=53.125, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI4885495, Length=63, Percent_Identity=50.7936507936508, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=48.4375, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1787235, Length=344, Percent_Identity=36.046511627907, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1786197, Length=363, Percent_Identity=31.9559228650138, Blast_Score=145, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17534355, Length=338, Percent_Identity=29.2899408284024, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=53.125, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17553096, Length=66, Percent_Identity=46.969696969697, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17553098, Length=66, Percent_Identity=46.969696969697, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17538236, Length=109, Percent_Identity=38.5321100917431, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554644, Length=127, Percent_Identity=36.2204724409449, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=182, Percent_Identity=35.1648351648352, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322388, Length=117, Percent_Identity=37.6068376068376, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=352, Percent_Identity=28.4090909090909, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323813, Length=136, Percent_Identity=38.2352941176471, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323119, Length=84, Percent_Identity=46.4285714285714, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321094, Length=400, Percent_Identity=24.5, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85726398, Length=358, Percent_Identity=29.0502793296089, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24658562, Length=336, Percent_Identity=28.2738095238095, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24658555, Length=336, Percent_Identity=28.2738095238095, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI45549272, Length=378, Percent_Identity=26.4550264550265, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI45552813, Length=378, Percent_Identity=26.4550264550265, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI45552811, Length=378, Percent_Identity=26.4550264550265, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI18858081, Length=335, Percent_Identity=24.1791044776119, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24668492, Length=63, Percent_Identity=46.031746031746, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17737735, Length=63, Percent_Identity=52.3809523809524, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24668523, Length=63, Percent_Identity=52.3809523809524, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574723, Length=63, Percent_Identity=52.3809523809524, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI18859921, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 36161; Mature: 36030

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKSFYEVLGVSKDASEQDIKKAYRKLVRKYHPDVSDAKDADEKIAEINNAYETLRDKE
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRAQYDAMQANPFAGAGFGSGAGFGSGGSGAQGGFRWEDIKDQFGEGAPFGSGSFRFDDI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCHHHH
FSAFGAGRGGAQSSRQSGFEGYDHFGSGFKDAGPAPGQDQHAEINVSLDSVYSGDDYSIK
HHHHCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCEEEE
LNVPSRQPNGSVIQEQKTLKIKIPKGITEGKQIRLSGQGAASYGGGKNGDLFLKVKITHD
EECCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECC
ANIRLEGADVYQTVNITPWEAALGEKINISTPAGTLGVTIPKNSKSGSNLRVKGKGIPAK
CCEEEECCCEEEEECCCCHHHHHCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCC
QAGDLYLTLNIVNPELTTEAQKEAFAALKASFAEAEIKR
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEKSFYEVLGVSKDASEQDIKKAYRKLVRKYHPDVSDAKDADEKIAEINNAYETLRDKE
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRAQYDAMQANPFAGAGFGSGAGFGSGGSGAQGGFRWEDIKDQFGEGAPFGSGSFRFDDI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCHHHH
FSAFGAGRGGAQSSRQSGFEGYDHFGSGFKDAGPAPGQDQHAEINVSLDSVYSGDDYSIK
HHHHCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCEEEE
LNVPSRQPNGSVIQEQKTLKIKIPKGITEGKQIRLSGQGAASYGGGKNGDLFLKVKITHD
EECCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECC
ANIRLEGADVYQTVNITPWEAALGEKINISTPAGTLGVTIPKNSKSGSNLRVKGKGIPAK
CCEEEECCCEEEEECCCCHHHHHCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCC
QAGDLYLTLNIVNPELTTEAQKEAFAALKASFAEAEIKR
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA