Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148651843
Identifier: 148651843
GI number: 148651843
Start: 37111
End: 37845
Strand: Direct
Name: 148651843
Synonym: PsycPRwf_0026
Alternate gene names: NA
Gene position: 37111-37845 (Clockwise)
Preceding gene: 148651842
Following gene: 148651844
Centisome position: 1.25
GC content: 48.71
Gene sequence:
>735_bases ATGAATAAAGCGCTTAAGCTGCCAAATAAGGGTCTGAAACTAGCGGTAGGCGGCGCCTCACTAATGGCGCTATTATTGGC ATCAGGCTGTGCTACTACTGAGCTGCTAAACTCAGGAAGCAGTAGCAGCCATACCACCACCAGCGAGCAGGTGTTGGTGG AGGATCAGTTGGTGGCCTTTGGTCGCCCTGCCACGCCGCTGGCCAATATGCCCTCAAGTAGCGTGGTCATAGTGGGTGAA AAATACAGCTATGTACTCAGCCAAGGCGGCCCGGAGATGGTCAATCTATTGACCAATCTAACCCCTAAAAATATCCGCGT TGATAACGACATGCGCTTTTACTCTCCCAATAACGACGGGCACTTCCAAGGACAAATGAAGCTGTCTTATGCCAAGCTAA AAGATGAGTTTCAGCGCAGCGATTACAATTTCTTCTTACAAAATGGCGGTAAAGAGTGCAGTAGCTCAAGTGATGAGCGT ATGAATGCCCAGCGCTTTTGCTTTACCGTACCCATTAAAGGTGGTGTCTATCCGGCAGTTAGTAATCTGAGCCTGATACA ATCTAAATATAGTGCCTTAACCAAGCCTTATCCGGTCACTATCTATACCAATGGCAAAACCACCACAACCACCAACAATG GTGCCAGTGCGGCGGGCAAGCTGGTGTTATTGCCTTTCGCTCTAGCCTTTGATGTGGTGACGTTCCCTTTCCAGTTGCTT GATGCCGCCAATTAA
Upstream 100 bases:
>100_bases AAAAACCTGCAGGGTTGGTAAAAGGATATTGACACTCAAGCGTACTGATAATATATACTAAATATTGGATTTAAAACATC ATAATAAATAAGGATATTTT
Downstream 100 bases:
>100_bases GTCGCTATAGCGTCAAGTCATAGGCTAAGGGCTAGAGAATAGAAATGGATAGCCCAAGCCTAGTGTTGATAAAACAGAGA ATGGTGAGGATGTATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNKALKLPNKGLKLAVGGASLMALLLASGCATTELLNSGSSSSHTTTSEQVLVEDQLVAFGRPATPLANMPSSSVVIVGE KYSYVLSQGGPEMVNLLTNLTPKNIRVDNDMRFYSPNNDGHFQGQMKLSYAKLKDEFQRSDYNFFLQNGGKECSSSSDER MNAQRFCFTVPIKGGVYPAVSNLSLIQSKYSALTKPYPVTIYTNGKTTTTTNNGASAAGKLVLLPFALAFDVVTFPFQLL DAAN
Sequences:
>Translated_244_residues MNKALKLPNKGLKLAVGGASLMALLLASGCATTELLNSGSSSSHTTTSEQVLVEDQLVAFGRPATPLANMPSSSVVIVGE KYSYVLSQGGPEMVNLLTNLTPKNIRVDNDMRFYSPNNDGHFQGQMKLSYAKLKDEFQRSDYNFFLQNGGKECSSSSDER MNAQRFCFTVPIKGGVYPAVSNLSLIQSKYSALTKPYPVTIYTNGKTTTTTNNGASAAGKLVLLPFALAFDVVTFPFQLL DAAN >Mature_244_residues MNKALKLPNKGLKLAVGGASLMALLLASGCATTELLNSGSSSSHTTTSEQVLVEDQLVAFGRPATPLANMPSSSVVIVGE KYSYVLSQGGPEMVNLLTNLTPKNIRVDNDMRFYSPNNDGHFQGQMKLSYAKLKDEFQRSDYNFFLQNGGKECSSSSDER MNAQRFCFTVPIKGGVYPAVSNLSLIQSKYSALTKPYPVTIYTNGKTTTTTNNGASAAGKLVLLPFALAFDVVTFPFQLL DAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26259; Mature: 26259
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKALKLPNKGLKLAVGGASLMALLLASGCATTELLNSGSSSSHTTTSEQVLVEDQLVAF CCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHC GRPATPLANMPSSSVVIVGEKYSYVLSQGGPEMVNLLTNLTPKNIRVDNDMRFYSPNNDG CCCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCC HFQGQMKLSYAKLKDEFQRSDYNFFLQNGGKECSSSSDERMNAQRFCFTVPIKGGVYPAV EEEEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEECCCCCCHHH SNLSLIQSKYSALTKPYPVTIYTNGKTTTTTNNGASAAGKLVLLPFALAFDVVTFPFQLL HHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH DAAN CCCC >Mature Secondary Structure MNKALKLPNKGLKLAVGGASLMALLLASGCATTELLNSGSSSSHTTTSEQVLVEDQLVAF CCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHC GRPATPLANMPSSSVVIVGEKYSYVLSQGGPEMVNLLTNLTPKNIRVDNDMRFYSPNNDG CCCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCC HFQGQMKLSYAKLKDEFQRSDYNFFLQNGGKECSSSSDERMNAQRFCFTVPIKGGVYPAV EEEEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEECCCCCCHHH SNLSLIQSKYSALTKPYPVTIYTNGKTTTTTNNGASAAGKLVLLPFALAFDVVTFPFQLL HHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH DAAN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA