Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is arcA [C]
Identifier: 148550832
GI number: 148550832
Start: 303363
End: 303761
Strand: Direct
Name: arcA [C]
Synonym: Swit_5396
Alternate gene names: 148550832
Gene position: 303363-303761 (Clockwise)
Preceding gene: 148550831
Following gene: 148550835
Centisome position: 97.79
GC content: 59.9
Gene sequence:
>399_bases ATGTGTTGCTGTATTACCGAGGATTGCATGATGGCCGATAGGCAACATGTTTTGGTTGTCGATGACGAGCCGGTGCTCCG GATGATCCTTGTCGATCTCCTGGAGGGCGAGGGATATGCGGTCGAGGAGGCTTCCAACGCCGCCGGAGCTCTTGAAGTCC TGCAGGCGCTGCCCTCGATCCGGATTGTCGTCACCGATATCCAGATGCCCGGATCGATGGATGGCTTGCGCCTGGCGCGC TATATTCGCGATGCCTATCCTCCCATCGCCCTTATCGTTTCCTCAGGCACCGTTCGGCCCGAGCAAGGCGCGTTGCCCGA CGATGCTGTCTTTCTCTCGAAGCCGGTCGACCATCGCGAATTGCTCCGCGTGATTGAGGACCGCGTCTCGGCCGCCTGA
Upstream 100 bases:
>100_bases AAGCGTCACAGTTCGTCGAAAATCAGAAAGAATTCTGCGCTTTTGCCGCCTCGTCTGTGAACCATGGCCCCCTGCCGCCG TTCATAGGGAAACGGGGCAT
Downstream 100 bases:
>100_bases AAAGGCAGCCGCGGAGCGGCAAGCCTCCATCAGGGGCGCCTTAGAAAAGCATCAGAGCGGCCGCGAGGATGAGGGATCCT GCGACAATGGCGCCCGCGAT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator; PAS/PAC Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator Protein; Two Component Sensor Kinase/Response Regulator Hybrid; Multi-Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Integral Membrane Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; ATPase Domain-Containing Protein; Two Component Response Regulator; Sensory Box Histidine Kinase/Response Regulator
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MCCCITEDCMMADRQHVLVVDDEPVLRMILVDLLEGEGYAVEEASNAAGALEVLQALPSIRIVVTDIQMPGSMDGLRLAR YIRDAYPPIALIVSSGTVRPEQGALPDDAVFLSKPVDHRELLRVIEDRVSAA
Sequences:
>Translated_132_residues MCCCITEDCMMADRQHVLVVDDEPVLRMILVDLLEGEGYAVEEASNAAGALEVLQALPSIRIVVTDIQMPGSMDGLRLAR YIRDAYPPIALIVSSGTVRPEQGALPDDAVFLSKPVDHRELLRVIEDRVSAA >Mature_132_residues MCCCITEDCMMADRQHVLVVDDEPVLRMILVDLLEGEGYAVEEASNAAGALEVLQALPSIRIVVTDIQMPGSMDGLRLAR YIRDAYPPIALIVSSGTVRPEQGALPDDAVFLSKPVDHRELLRVIEDRVSAA
Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Represses A Wide Variety Of Aerobic Enzymes Under Anaerobic Conditions. Controls The Resistance Of E.Coli To Dyes; Required For Expression Of The Alkaline Phosphatase And Sex Factor F Genes; It Als
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14405; Mature: 14405
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCCITEDCMMADRQHVLVVDDEPVLRMILVDLLEGEGYAVEEASNAAGALEVLQALPSI CCEEECHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCE RIVVTDIQMPGSMDGLRLARYIRDAYPPIALIVSSGTVRPEQGALPDDAVFLSKPVDHRE EEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCHHH LLRVIEDRVSAA HHHHHHHHHCCC >Mature Secondary Structure MCCCITEDCMMADRQHVLVVDDEPVLRMILVDLLEGEGYAVEEASNAAGALEVLQALPSI CCEEECHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCE RIVVTDIQMPGSMDGLRLARYIRDAYPPIALIVSSGTVRPEQGALPDDAVFLSKPVDHRE EEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCHHH LLRVIEDRVSAA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA