Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is dsbC [C]
Identifier: 148550805
GI number: 148550805
Start: 275546
End: 276427
Strand: Direct
Name: dsbC [C]
Synonym: Swit_5369
Alternate gene names: 148550805
Gene position: 275546-276427 (Clockwise)
Preceding gene: 148550804
Following gene: 148550806
Centisome position: 88.82
GC content: 67.69
Gene sequence:
>882_bases ATGTCCGTAACTGATCGCCTTCGCGCCGCTGCTGGGCGCACGCCCTGGAGCTTTGGCCTCATTGCCCTGCCGGTGGTGGG ACTGGGCGCTGCAGCCATCGCTGCCGCCGCCGTGCCGACCGAAGACAGCCAGGTCGCCGGCCTGCTCAAGGCCCGGCTAC CCAAGACCGAGATCAGCGCGGTCAACTGCGCCAAGGTCGCAGGGCTGTGCGAAGTGACGGCCGGCGCCAATCTCTTCTAT GTCGATCGCGGCGCCCGCTATCTGGTCATCGGCCGGGTCTACGACATGGAAACGCGGCAGGACGTGACGGCCGCACGCCT CCTGGAGATGAACCCCGACATGCTGGTCGGCGGCGCGGCCAAGGCCAATGCGACGGCCGCGCTCGGCGGCGAGGCGGACG CTTCTCCCGTCGCACCGACAGCCGGCGCGCGCCGTGTCTCCGTGCCAGTGCGCCCGGCCACGCTGTCGCTCGCTGGGCTG CCGCGCGACGGAGCGATCGTCTGGGGCAACAAGGCATCGAGCCAGTCGGTCACGGTCTTTACCGATTTTCGCTGCGGCTA CTGCCGCGCGCTTACCAGCGTGCTGCGCAGCATGGACGTCAAGGTCATCGAACGGCCCATTTCGGTCCTGGGCAGCCGGG ATCTGGCCGACCGCGTCTATTGCGCCAAGAACCGGGAAGAGGCGCTTCACGCCGCCTATTCCGGTGCGCCGTTCGAAAGC GGCGGCAAATGTGACACGCGCGGTCTCGACGCCAACGAGCAATTTGCCCGTAGCCATGGCCTGAGCGGAACCCCCGTGAT CGTTCGCAGCGACGGCGCCATGCTTGAGGGCTACCGGCCCAAGGATGTGCTGGAAGCATGGCTGAAGGGAGCCAAGTCGT GA
Upstream 100 bases:
>100_bases ATGGTCTCGAAATATCTGATCGAGCGCGCCGAACAGTATCAGCCGGTGATCGAGATGCCGACCGGCATCGATGTCGAAAT CGTCTTCTTGGAGGGTGTCT
Downstream 100 bases:
>100_bases AGGGCCGCGCCACGCACTGGCATGCTGGCCTGGCGCTCGCCGTCCTGCCGCTTATGGGGGGCTGCGCATCGTTCGGCAGC AATATCGCGGGCAGTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic ThiolDisulfide Interchange Protein; ThiolDisulfide Interchange Protein DsbC; Thiol-Disulfide Interchange Protein DsbC; Disulfide Bond Isomerase Periplasmic; Chitinase; Protein-Disulfide Isomerase; ThiolDisulfide Interchange Protein; Disulfide Isomerase; Disulfide Bond Isomerase DsbC/G-Like Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFY VDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGL PRDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS
Sequences:
>Translated_293_residues MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFY VDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGL PRDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS >Mature_292_residues SVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFYV DRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLP RDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFESG GKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS
Specific function: Required For Disulfide Bond Formation In Some Periplasmic Proteins. Acts By Transferring Its Disulfide Bond To Other Proteins And Is Reduced In The Process. Dsbc Is Reoxidized By A Yet Uncharacterized Protein. Also Acts As A Disulfide Isomerase. [C]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.3.4.1
Molecular weight: Translated: 30635; Mature: 30504
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISA CCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHH VNCAKVAGLCEVTAGANLFYVDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAA HHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCC KANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLPRDGAIVWGNKASSQSVTVF CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEEEE TDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS CCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure SVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISA CHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHH VNCAKVAGLCEVTAGANLFYVDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAA HHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCC KANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLPRDGAIVWGNKASSQSVTVF CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEEEE TDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS CCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA