Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550800
Identifier: 148550800
GI number: 148550800
Start: 272080
End: 272508
Strand: Direct
Name: 148550800
Synonym: Swit_5364
Alternate gene names: NA
Gene position: 272080-272508 (Clockwise)
Preceding gene: 148550797
Following gene: 148550801
Centisome position: 87.7
GC content: 69.23
Gene sequence:
>429_bases ATGCCTCCCGCAACGCGCCGGGCCGGGGAAGGTTGCCCGGCCGGCGAGCGAGGGGACAGCCTTCGATTGGGCGCGGAACC GCCGCGTCTCAATCGGAAGGAAATGCTCATGCAACAGGTACTGAAGCATGGCGGCCGGGCGGAGCTGGCGATCCTCGTGA TCGCGGCCCTGGCCTTCGCGCTGCTCATGTTTGCCGGACCGGCCTTCGCCGGCGCCGACACCACCTTCGACACCGCGCTC ACCAAGTTCACCGACTTCCTCGAGGGATCGGGCGGCAAGATCATCACCGTGCTCAGCCTCGCCGGCGGCGTGGTGGCGCT CGCCTCGGGCCGCTTCTCGATGGGTCAGATCGCCATCCCGGTGGGCGTCGGCGTGGGTGCCGGCACCGGCGTGCCGATCG TCACCTCGACCGTCACCGCAACGATCTGA
Upstream 100 bases:
>100_bases GTTGGCCGTCCTGGTCTGCACGGCGGGCCACACCGGCCCGCAGCGCGTACCGCAGCGGTTCGCGCGCGGCGCCAAGCGAC TCGGGCGGGAAGAAAAATTC
Downstream 100 bases:
>100_bases CGTGGGTTCGGGCCGGCGGCGTAGCAGCGCCGACGGTCCAAATGGAGGGTGGTGCGATGTCTGCGGACAAATATGTCATT CCAACTCATCTGGATGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPPATRRAGEGCPAGERGDSLRLGAEPPRLNRKEMLMQQVLKHGGRAELAILVIAALAFALLMFAGPAFAGADTTFDTAL TKFTDFLEGSGGKIITVLSLAGGVVALASGRFSMGQIAIPVGVGVGAGTGVPIVTSTVTATI
Sequences:
>Translated_142_residues MPPATRRAGEGCPAGERGDSLRLGAEPPRLNRKEMLMQQVLKHGGRAELAILVIAALAFALLMFAGPAFAGADTTFDTAL TKFTDFLEGSGGKIITVLSLAGGVVALASGRFSMGQIAIPVGVGVGAGTGVPIVTSTVTATI >Mature_141_residues PPATRRAGEGCPAGERGDSLRLGAEPPRLNRKEMLMQQVLKHGGRAELAILVIAALAFALLMFAGPAFAGADTTFDTALT KFTDFLEGSGGKIITVLSLAGGVVALASGRFSMGQIAIPVGVGVGAGTGVPIVTSTVTATI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14337; Mature: 14206
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPATRRAGEGCPAGERGDSLRLGAEPPRLNRKEMLMQQVLKHGGRAELAILVIAALAFA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLMFAGPAFAGADTTFDTALTKFTDFLEGSGGKIITVLSLAGGVVALASGRFSMGQIAIP HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHCCEEEEECCCCCCCEEEEE VGVGVGAGTGVPIVTSTVTATI EECCCCCCCCCCEEECEEEECC >Mature Secondary Structure PPATRRAGEGCPAGERGDSLRLGAEPPRLNRKEMLMQQVLKHGGRAELAILVIAALAFA CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLMFAGPAFAGADTTFDTALTKFTDFLEGSGGKIITVLSLAGGVVALASGRFSMGQIAIP HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHCCEEEEECCCCCCCEEEEE VGVGVGAGTGVPIVTSTVTATI EECCCCCCCCCCEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA