Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550793
Identifier: 148550793
GI number: 148550793
Start: 266733
End: 267236
Strand: Reverse
Name: 148550793
Synonym: Swit_5357
Alternate gene names: NA
Gene position: 267236-266733 (Counterclockwise)
Preceding gene: 148550794
Following gene: 148550785
Centisome position: 86.14
GC content: 64.88
Gene sequence:
>504_bases ATGATCTTGCCTGATTTCACCCGAACGCCTTTCGATCGCCGTGATCGTCCGGCCGGCCCCCCGCCTGCCCAGTTCGCCGT GCCGAAACGGCGAGACTGCGCTCTGCCCGAAACGCTGGGCACCGCCGCGCTGCGCGGCCTGCGCGGCTGCTGCCCAAGGT GCGGCGAAGCGGAACTATTCCACCGATTTCTCAAACCCGTGAGCATCTGCGCGCACTGCGGCCAGGACTGGAGCCATCAA CGCGCGGACGACTTCCCGGCCTATGTGGCGATCATCGTGACTGGTCACATCATGGCGCCCCTCATCATCGCGCTGGCCCG CGATTTCGCGCTCTCGGTCACCGCCATGATGGCAATCATCGTACCGCTGGCGCTTGTTCTGCTCCTTGGCCTGCTGCAGC CCGCCAAAGGCGCAATTATCGCGCTGCAGTGGTGGTGGGGCATGCATGGCTTCGAGAAGGAGCGAATAGCAGGGGCGGCC GAGGCTGGGGACGATGAACCGTAA
Upstream 100 bases:
>100_bases CATAAGTGCGCCTTCACATTTGAGTCTAAAAGCCCTATGATTGCTGCGGCAGTCTGCTGTCTACCGCCCCGCCCTTGTCT CTCTCATCGATAGCAGCGAG
Downstream 100 bases:
>100_bases AGGTCGCGGCCAGCCTCAGAGCGGCACTACGACCTCGAAAACGCTGCCCTCTCCCGGCGCGCTGCGCTTGAGGGCGATCG TCCCGCCGTGGAGCTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MILPDFTRTPFDRRDRPAGPPPAQFAVPKRRDCALPETLGTAALRGLRGCCPRCGEAELFHRFLKPVSICAHCGQDWSHQ RADDFPAYVAIIVTGHIMAPLIIALARDFALSVTAMMAIIVPLALVLLLGLLQPAKGAIIALQWWWGMHGFEKERIAGAA EAGDDEP
Sequences:
>Translated_167_residues MILPDFTRTPFDRRDRPAGPPPAQFAVPKRRDCALPETLGTAALRGLRGCCPRCGEAELFHRFLKPVSICAHCGQDWSHQ RADDFPAYVAIIVTGHIMAPLIIALARDFALSVTAMMAIIVPLALVLLLGLLQPAKGAIIALQWWWGMHGFEKERIAGAA EAGDDEP >Mature_167_residues MILPDFTRTPFDRRDRPAGPPPAQFAVPKRRDCALPETLGTAALRGLRGCCPRCGEAELFHRFLKPVSICAHCGQDWSHQ RADDFPAYVAIIVTGHIMAPLIIALARDFALSVTAMMAIIVPLALVLLLGLLQPAKGAIIALQWWWGMHGFEKERIAGAA EAGDDEP
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18235; Mature: 18235
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPDFTRTPFDRRDRPAGPPPAQFAVPKRRDCALPETLGTAALRGLRGCCPRCGEAELF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH HRFLKPVSICAHCGQDWSHQRADDFPAYVAIIVTGHIMAPLIIALARDFALSVTAMMAII HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLALVLLLGLLQPAKGAIIALQWWWGMHGFEKERIAGAAEAGDDEP HHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MILPDFTRTPFDRRDRPAGPPPAQFAVPKRRDCALPETLGTAALRGLRGCCPRCGEAELF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH HRFLKPVSICAHCGQDWSHQRADDFPAYVAIIVTGHIMAPLIIALARDFALSVTAMMAII HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLALVLLLGLLQPAKGAIIALQWWWGMHGFEKERIAGAAEAGDDEP HHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA