The gene/protein map for NC_009507 is currently unavailable.
Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

Click here to switch to the map view.

The map label for this gene is 148550783

Identifier: 148550783

GI number: 148550783

Start: 255321

End: 255743

Strand: Reverse

Name: 148550783

Synonym: Swit_5347

Alternate gene names: NA

Gene position: 255743-255321 (Counterclockwise)

Preceding gene: 148550785

Following gene: 148550782

Centisome position: 82.44

GC content: 64.54

Gene sequence:

>423_bases
ATGAGCATCTTCGGCAACATTCTAGGCAAGATCTTCCACCCGAACGCGGCCAAGGCCGCGCCCGCGAGTCCTGCGCCCTC
CGCCGCGCCTGCCGCGCCAAGTCCCGCCCCAGCGCCCACGACCCCTGCTCCGGCCCCCGCCGCCGCTGCACCGGCGCAAA
CATCGGTCGACGTCGGGCCCGTCCTGGAGGCTATGGCCGCTATGAAGGACGATCATGGCGGCAACTACAAGACGTCGATC
GTCGATCTCCTGAAGCTTCTCGATCTCGATTCCAGTCTCACCGCCCGAAAGGAGCTGGCCGAGGAACTCGGGGTGAATGC
CGGCGAACCCGGTTCAGCCGAACAGAATATCGCGCTTCACCGCGCCGTCATGGACAAGCTTGCCGAAAATGGCGGCATTG
TTCCCGACGACATGCGCAATTAG

Upstream 100 bases:

>100_bases
CGGACCAGGCTTCATCGTTCCAGCGGCGGACCTTTTCGAACGCGGGACGTTTCACCCCTGCCCGCCTGCCGCGCGGCATG
AGACCCAAGGAGACGAGACG

Downstream 100 bases:

>100_bases
GCGGTTGCGCATCGCGGCTGTTCCAACGGAGCAGCCGCATTGCCGCAACGACGATCCAGCGAGTGACGACGGCTGCAAAG
GCGTGCAGGCCGGGCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSI
VDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN

Sequences:

>Translated_140_residues
MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSI
VDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN
>Mature_139_residues
SIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSIV
DLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14109; Mature: 13978

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGP
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLEAMAAMKDDHGGNYKTSIVDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALH
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RAVMDKLAENGGIVPDDMRN
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGP
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLEAMAAMKDDHGGNYKTSIVDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALH
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RAVMDKLAENGGIVPDDMRN
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA