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The map label for this gene is cspG [C]

Identifier: 148550775

GI number: 148550775

Start: 249976

End: 250191

Strand: Direct

Name: cspG [C]

Synonym: Swit_5339

Alternate gene names: 148550775

Gene position: 249976-250191 (Clockwise)

Preceding gene: 148550774

Following gene: 148550780

Centisome position: 80.58

GC content: 60.19

Gene sequence:

>216_bases
ATGAGCACCATCACCGGCACCGTCAAATTCTTCAACGCCGACAAGGGTTATGGCTTCATCGCCCCCGAAACCGGCGGACA
GGATGCGTTCGTCCACATCTCGGCAGTCGAGCGCGCGGGCTTTAACACGCTCAACCAGAACCAGCGGCTCAGCTATGAAC
TGGAAACCGACCGCCGCGGCAAGACCAGCGCGGTCAACCTGCAAACGCAGGACTGA

Upstream 100 bases:

>100_bases
TCTTTCGGTGCTTTGCGGCTCTGCTCTTCCTTCTTTCCCTGCTCCTCGCAGCACGAGGATTCCCGATCTCCGGGAGCCCG
ATCCTAGAAGGATATCTCAC

Downstream 100 bases:

>100_bases
GCGACGAGGAGGGCGGCATGAAATGCCGCCCTTTGGTTTTTATTCGAAAGGATTGTTCATGGCGAATGACGCTGAGCATT
ATCGCGGGCTGGCGGCCCGC

Product: cold-shock DNA-binding protein family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MSTITGTVKFFNADKGYGFIAPETGGQDAFVHISAVERAGFNTLNQNQRLSYELETDRRGKTSAVNLQTQD

Sequences:

>Translated_71_residues
MSTITGTVKFFNADKGYGFIAPETGGQDAFVHISAVERAGFNTLNQNQRLSYELETDRRGKTSAVNLQTQD
>Mature_70_residues
STITGTVKFFNADKGYGFIAPETGGQDAFVHISAVERAGFNTLNQNQRLSYELETDRRGKTSAVNLQTQD

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=61, Percent_Identity=49.1803278688525, Blast_Score=74, Evalue=2e-15,
Organism=Escherichia coli, GI1786841, Length=64, Percent_Identity=48.4375, Blast_Score=72, Evalue=7e-15,
Organism=Escherichia coli, GI1789979, Length=61, Percent_Identity=44.2622950819672, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI1787839, Length=61, Percent_Identity=44.2622950819672, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1788126, Length=67, Percent_Identity=44.7761194029851, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1787834, Length=61, Percent_Identity=42.6229508196721, Blast_Score=64, Evalue=1e-12,
Organism=Escherichia coli, GI1787107, Length=65, Percent_Identity=38.4615384615385, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7815; Mature: 7683

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITGTVKFFNADKGYGFIAPETGGQDAFVHISAVERAGFNTLNQNQRLSYELETDRRG
CCCCCEEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
KTSAVNLQTQD
CCEEEEEEECC
>Mature Secondary Structure 
STITGTVKFFNADKGYGFIAPETGGQDAFVHISAVERAGFNTLNQNQRLSYELETDRRG
CCCCEEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
KTSAVNLQTQD
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]