Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550738
Identifier: 148550738
GI number: 148550738
Start: 200802
End: 201335
Strand: Reverse
Name: 148550738
Synonym: Swit_5302
Alternate gene names: NA
Gene position: 201335-200802 (Counterclockwise)
Preceding gene: 148550739
Following gene: 148550737
Centisome position: 64.9
GC content: 66.48
Gene sequence:
>534_bases ATGAACCTTGCCGATCTGCTTCCCGAAGGAAGCCTCGACGCCTTGACCCAGCAACTTGGCATTTCACGCGAAGATGCCGA ACGCGGGGCGCAGGCTCTTCTTCCCTCGCTCATCGGCAGTATCAACGGCAAGACGGCGGCCCCGGTTGAACCGGCGGGTC TAGCGGCCCAGGTCCAGGCGCTGGGCGGCTCGGGGCTCATCGATAATGTCGTCGGCTCCAGCCCCACTGACACCGGCATT GGCAATCAACTGCTGGGGAGCCTGTTCGGCTCGAAGGACGTCAGCCGGGAGGTCGCCGGGGAAGCATCGCAAGCCACTGG CCTCGATCCCGCGATCCTCAAGAAGATGCTCCCTATCCTCGCGATGCTCGTCGCGGGGCACCTCGCCAAGCGCTCCGGGG GGCAGCAGGGCGGACTGGAATCCATTCTCGGCAGCATTGCCGGTGCGCTCGCCGGTAGCAGCGGGTCCTCCGGGAGCGCC GCGTCAGCCGGCGGACTCGGCGGCATATTGGGATCGATCCTGGGCGGCCGTTGA
Upstream 100 bases:
>100_bases CAAGTATCGGCGCGGCTGAAAGCCTGTTGACGCCCTAACCGATGATGCCCACCCCTGGGTGCAACGCTGCCCCGCCCCAC ATGCGAATTGGAGACGTGAC
Downstream 100 bases:
>100_bases CCGCCCTCCCTTTCAACCGACTTTGGGGCAGGCCTGCTTATGGACGACCGCGCGCAGATCGAGCATGCCGAAGGCCGGCT TCGTGCGGCGATGCTCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNLADLLPEGSLDALTQQLGISREDAERGAQALLPSLIGSINGKTAAPVEPAGLAAQVQALGGSGLIDNVVGSSPTDTGI GNQLLGSLFGSKDVSREVAGEASQATGLDPAILKKMLPILAMLVAGHLAKRSGGQQGGLESILGSIAGALAGSSGSSGSA ASAGGLGGILGSILGGR
Sequences:
>Translated_177_residues MNLADLLPEGSLDALTQQLGISREDAERGAQALLPSLIGSINGKTAAPVEPAGLAAQVQALGGSGLIDNVVGSSPTDTGI GNQLLGSLFGSKDVSREVAGEASQATGLDPAILKKMLPILAMLVAGHLAKRSGGQQGGLESILGSIAGALAGSSGSSGSA ASAGGLGGILGSILGGR >Mature_177_residues MNLADLLPEGSLDALTQQLGISREDAERGAQALLPSLIGSINGKTAAPVEPAGLAAQVQALGGSGLIDNVVGSSPTDTGI GNQLLGSLFGSKDVSREVAGEASQATGLDPAILKKMLPILAMLVAGHLAKRSGGQQGGLESILGSIAGALAGSSGSSGSA ASAGGLGGILGSILGGR
Specific function: Unknown
COG id: COG5403
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17034; Mature: 17034
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLADLLPEGSLDALTQQLGISREDAERGAQALLPSLIGSINGKTAAPVEPAGLAAQVQA CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LGGSGLIDNVVGSSPTDTGIGNQLLGSLFGSKDVSREVAGEASQATGLDPAILKKMLPIL HCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHH AMLVAGHLAKRSGGQQGGLESILGSIAGALAGSSGSSGSAASAGGLGGILGSILGGR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNLADLLPEGSLDALTQQLGISREDAERGAQALLPSLIGSINGKTAAPVEPAGLAAQVQA CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LGGSGLIDNVVGSSPTDTGIGNQLLGSLFGSKDVSREVAGEASQATGLDPAILKKMLPIL HCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHH AMLVAGHLAKRSGGQQGGLESILGSIAGALAGSSGSSGSAASAGGLGGILGSILGGR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA