Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550737
Identifier: 148550737
GI number: 148550737
Start: 200382
End: 200762
Strand: Reverse
Name: 148550737
Synonym: Swit_5301
Alternate gene names: NA
Gene position: 200762-200382 (Counterclockwise)
Preceding gene: 148550738
Following gene: 148550730
Centisome position: 64.71
GC content: 65.88
Gene sequence:
>381_bases ATGGACGACCGCGCGCAGATCGAGCATGCCGAAGGCCGGCTTCGTGCGGCGATGCTCGCCAGCGATGTGGCGACCCTTGA TGCCCTGCTCAGCCCCGATCTGATTTTTACCAACCAGGTCGGCGTGCGGCTCGACAAGGGCGATGATCTCGGCGCTCACC AGTCCGGCCTGCTTCGCATCGAACAACTGGACCCCATCGAGCCACCCCTCATTCGCCTCCTGGGCGACAGCGCGGTGGTC TGCGTCACGGTCCAGTTGTCGGGATCCTACGACGCGCAACCTTTCAGCGGCACCTTCGCCTATACGCGCTGCTGGCACCG GCTGCCGGGCGATCAGTGGCGCATCGAGGCGGCCCATTGCTCGCCCGTCGTTCGGCCATGA
Upstream 100 bases:
>100_bases GAGCGCCGCGTCAGCCGGCGGACTCGGCGGCATATTGGGATCGATCCTGGGCGGCCGTTGACCGCCCTCCCTTTCAACCG ACTTTGGGGCAGGCCTGCTT
Downstream 100 bases:
>100_bases TCGTTCCGCAGGATCGGCGCGGTCGTTGACCGGCCGACCGCTTCCCTCGCGCTCCTAAGCTCGCAAGGCCACGGGCTGGA AGGCGCTCGCGGCTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MDDRAQIEHAEGRLRAAMLASDVATLDALLSPDLIFTNQVGVRLDKGDDLGAHQSGLLRIEQLDPIEPPLIRLLGDSAVV CVTVQLSGSYDAQPFSGTFAYTRCWHRLPGDQWRIEAAHCSPVVRP
Sequences:
>Translated_126_residues MDDRAQIEHAEGRLRAAMLASDVATLDALLSPDLIFTNQVGVRLDKGDDLGAHQSGLLRIEQLDPIEPPLIRLLGDSAVV CVTVQLSGSYDAQPFSGTFAYTRCWHRLPGDQWRIEAAHCSPVVRP >Mature_126_residues MDDRAQIEHAEGRLRAAMLASDVATLDALLSPDLIFTNQVGVRLDKGDDLGAHQSGLLRIEQLDPIEPPLIRLLGDSAVV CVTVQLSGSYDAQPFSGTFAYTRCWHRLPGDQWRIEAAHCSPVVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13805; Mature: 13805
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDRAQIEHAEGRLRAAMLASDVATLDALLSPDLIFTNQVGVRLDKGDDLGAHQSGLLRI CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCEEE EQLDPIEPPLIRLLGDSAVVCVTVQLSGSYDAQPFSGTFAYTRCWHRLPGDQWRIEAAHC ECCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC SPVVRP CCCCCC >Mature Secondary Structure MDDRAQIEHAEGRLRAAMLASDVATLDALLSPDLIFTNQVGVRLDKGDDLGAHQSGLLRI CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCEEE EQLDPIEPPLIRLLGDSAVVCVTVQLSGSYDAQPFSGTFAYTRCWHRLPGDQWRIEAAHC ECCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC SPVVRP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA