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The map label for this gene is 148550706

Identifier: 148550706

GI number: 148550706

Start: 165126

End: 166805

Strand: Reverse

Name: 148550706

Synonym: Swit_5270

Alternate gene names: NA

Gene position: 166805-165126 (Counterclockwise)

Preceding gene: 148550707

Following gene: 148550701

Centisome position: 53.77

GC content: 66.43

Gene sequence:

>1680_bases
ATGTCCAATGTGGTGCCTTTCGGGGCCACGTCGTCTGCCCATCGCCCGCTCGAGCAAGCGGGCGGACCATTCGCCGACAT
CGACCTCATCCACTCGATCAGCGTCGCGCTGAGCGGCGAGCAGGACCGCGTCGAGCTCTATGGCAAGATTGTGGACGCGG
CGATCACCATCACCCAGTCGCAGTTCGGTACGATGCAGCTCGTCGTGCCGCCCGGCGATGTCTCGGGCCATGCGGGCTGC
CTCCAGCTTCTCTGCTCGCGTGGGCTGCCGCCTGAGGCGGTGCAGTTCTGGCAGATCGTCAGCCCCGCGGCTCACAGCAG
TTGCACCAAGGCGCTCAAGACCGGCAGCCGCGCGATCATTCCCGATTATGAGGAATGGGACGAAATCGCGGGCACCGAGG
ATCTCGAGGCGTTCCGCCGCACCGCCATCCGATCCGCGCAGACCACGCCGCTTCTCGCGCGCGACGGACGCCTGCTCGGG
ATGATCTCGACCCATTGGACCGAGCCGCACGAGCCCTCGCCGCGCGATCTCCGGCTCCTCGACATCCTCGCCCGCCAGGC
GGCCGATCTTCTCGAACGGACGATTGCCGACGAAGCGCTGCGCGAACGCAAGGAGGAACTCGACCGGACCTGCGCGGCGC
TGCGCGAATCCGAGCAGCTCCGGAAGATGCTGACCGGCGAGCTCAGCCACCGCGTCAAGAACATGCTCGCAACCGTCCAG
GCAATCTCGACACAGACCCTGCGCAACTGCAGCGATCCCGCCGAATTCGTCGAGAGCTTTTCGGGCCGCATCCAGTCGAT
GGCCCGGGTCCACTCGCAGCTCAGCACCACGGACTGGAAAGGCACGGAGCTACGCGCCGTCGTCGAAGAGGGGATGAAAC
TCGGACCCGTCGACGAGCCGCAGATTGCCGCGTCAGGCCCCGACATCCATCTCAATGCCAACGCCGTGCCGAAGATGGCG
ATGATCCTGCACGAGCTCGGCACCAATGCGCGCAAATACGGCGCTCTCTCTCGTGCCGGCGGCACGGTCGACATCCGTTG
GACTGTCCGACCGGGACAACTCGCGCTCAGCTGGACCGAGCGCGGTGGTCCCAGGGTCCAGGCGCCCGTCCGCCGCGGCT
TTGGATCGCGGCTGATCGAAGCGACCGTTCGCGGCGTTCACGGCAATGCCGATATGAGCATCGAGGCCGAGGGCGTACGC
TGGGAGATCCAGTTTCCGCTGCCGGACGACGAGGACTCAGCAATCGAAGCTGGCAAGCGGCGGGCGGGGCAGGGTTCGCT
CGCCGAGCAGGCCGGCCTTGGGCCATCGCGCCAACCGGCATGGCACAATCTTGCAGGCAAGCACGTGCTTGTCGTCGAGG
ACGAGCCGCTCCTGGCCCTCGATATCGTCGGCCAGCTCGAGGACGCAGGTACCATCATCGTCGGACCCGCCGCCGATCTG
CGGGCGGCGCTCGACCTCATCGCACACCATCGGATCGACATCGCCCTGCTCGACGCCAATCTCTCGGGTGAACCGGTCGA
CGATATCGCGCATGCGCTCGCCGCGCGGTCCATCCCCTTCCTGTTCATGAGCGGCTATGGGCGCGAGAACCTGCCCCCGG
CTTTCCCGCACATCGAACTGCTCTCCAAGCCCTTCGACGCGCGGCAGCTTCTCACGCTTGCCGACAGGATGCTTGCCTGA

Upstream 100 bases:

>100_bases
ACCCTCGCTTTCTTTGCGACGGCCGGAAACCATTTTGCGATGGTCCGCGTTTATGCCTGTCACGCGTAGCAATTTTTCCG
CCTTCGGGGGATATCTCCTC

Downstream 100 bases:

>100_bases
CCAATTGGGGGGTGGCACGCCGTGCCGGCCTCTAGCGCTTAGGGACGATCCCGGGCGGGCTTGGCGGCCGCTATGCCAAG
TTTCCGGCGACCCTTGCCAC

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MSNVVPFGATSSAHRPLEQAGGPFADIDLIHSISVALSGEQDRVELYGKIVDAAITITQSQFGTMQLVVPPGDVSGHAGC
LQLLCSRGLPPEAVQFWQIVSPAAHSSCTKALKTGSRAIIPDYEEWDEIAGTEDLEAFRRTAIRSAQTTPLLARDGRLLG
MISTHWTEPHEPSPRDLRLLDILARQAADLLERTIADEALRERKEELDRTCAALRESEQLRKMLTGELSHRVKNMLATVQ
AISTQTLRNCSDPAEFVESFSGRIQSMARVHSQLSTTDWKGTELRAVVEEGMKLGPVDEPQIAASGPDIHLNANAVPKMA
MILHELGTNARKYGALSRAGGTVDIRWTVRPGQLALSWTERGGPRVQAPVRRGFGSRLIEATVRGVHGNADMSIEAEGVR
WEIQFPLPDDEDSAIEAGKRRAGQGSLAEQAGLGPSRQPAWHNLAGKHVLVVEDEPLLALDIVGQLEDAGTIIVGPAADL
RAALDLIAHHRIDIALLDANLSGEPVDDIAHALAARSIPFLFMSGYGRENLPPAFPHIELLSKPFDARQLLTLADRMLA

Sequences:

>Translated_559_residues
MSNVVPFGATSSAHRPLEQAGGPFADIDLIHSISVALSGEQDRVELYGKIVDAAITITQSQFGTMQLVVPPGDVSGHAGC
LQLLCSRGLPPEAVQFWQIVSPAAHSSCTKALKTGSRAIIPDYEEWDEIAGTEDLEAFRRTAIRSAQTTPLLARDGRLLG
MISTHWTEPHEPSPRDLRLLDILARQAADLLERTIADEALRERKEELDRTCAALRESEQLRKMLTGELSHRVKNMLATVQ
AISTQTLRNCSDPAEFVESFSGRIQSMARVHSQLSTTDWKGTELRAVVEEGMKLGPVDEPQIAASGPDIHLNANAVPKMA
MILHELGTNARKYGALSRAGGTVDIRWTVRPGQLALSWTERGGPRVQAPVRRGFGSRLIEATVRGVHGNADMSIEAEGVR
WEIQFPLPDDEDSAIEAGKRRAGQGSLAEQAGLGPSRQPAWHNLAGKHVLVVEDEPLLALDIVGQLEDAGTIIVGPAADL
RAALDLIAHHRIDIALLDANLSGEPVDDIAHALAARSIPFLFMSGYGRENLPPAFPHIELLSKPFDARQLLTLADRMLA
>Mature_558_residues
SNVVPFGATSSAHRPLEQAGGPFADIDLIHSISVALSGEQDRVELYGKIVDAAITITQSQFGTMQLVVPPGDVSGHAGCL
QLLCSRGLPPEAVQFWQIVSPAAHSSCTKALKTGSRAIIPDYEEWDEIAGTEDLEAFRRTAIRSAQTTPLLARDGRLLGM
ISTHWTEPHEPSPRDLRLLDILARQAADLLERTIADEALRERKEELDRTCAALRESEQLRKMLTGELSHRVKNMLATVQA
ISTQTLRNCSDPAEFVESFSGRIQSMARVHSQLSTTDWKGTELRAVVEEGMKLGPVDEPQIAASGPDIHLNANAVPKMAM
ILHELGTNARKYGALSRAGGTVDIRWTVRPGQLALSWTERGGPRVQAPVRRGFGSRLIEATVRGVHGNADMSIEAEGVRW
EIQFPLPDDEDSAIEAGKRRAGQGSLAEQAGLGPSRQPAWHNLAGKHVLVVEDEPLLALDIVGQLEDAGTIIVGPAADLR
AALDLIAHHRIDIALLDANLSGEPVDDIAHALAARSIPFLFMSGYGRENLPPAFPHIELLSKPFDARQLLTLADRMLA

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60639; Mature: 60507

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVVPFGATSSAHRPLEQAGGPFADIDLIHSISVALSGEQDRVELYGKIVDAAITITQS
CCCCCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHEECCCHHHHHHHHHHHHHHEEEEEC
QFGTMQLVVPPGDVSGHAGCLQLLCSRGLPPEAVQFWQIVSPAAHSSCTKALKTGSRAII
CCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC
PDYEEWDEIAGTEDLEAFRRTAIRSAQTTPLLARDGRLLGMISTHWTEPHEPSPRDLRLL
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEHHHCCCCCCCCCCCHHHHH
DILARQAADLLERTIADEALRERKEELDRTCAALRESEQLRKMLTGELSHRVKNMLATVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISTQTLRNCSDPAEFVESFSGRIQSMARVHSQLSTTDWKGTELRAVVEEGMKLGPVDEP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
QIAASGPDIHLNANAVPKMAMILHELGTNARKYGALSRAGGTVDIRWTVRPGQLALSWTE
CEECCCCCEEECCCCHHHHHHHHHHHCCCHHHHCCHHCCCCEEEEEEEECCCCEEEEEEC
RGGPRVQAPVRRGFGSRLIEATVRGVHGNADMSIEAEGVRWEIQFPLPDDEDSAIEAGKR
CCCCEEEHHHHHCHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHH
RAGQGSLAEQAGLGPSRQPAWHNLAGKHVLVVEDEPLLALDIVGQLEDAGTIIVGPAADL
CCCCCCHHHHHCCCCCCCCCHHCCCCCEEEEECCCCEEEEHHHHHHCCCCEEEECCCHHH
RAALDLIAHHRIDIALLDANLSGEPVDDIAHALAARSIPFLFMSGYGRENLPPAFPHIEL
HHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
LSKPFDARQLLTLADRMLA
HCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SNVVPFGATSSAHRPLEQAGGPFADIDLIHSISVALSGEQDRVELYGKIVDAAITITQS
CCCCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHEECCCHHHHHHHHHHHHHHEEEEEC
QFGTMQLVVPPGDVSGHAGCLQLLCSRGLPPEAVQFWQIVSPAAHSSCTKALKTGSRAII
CCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC
PDYEEWDEIAGTEDLEAFRRTAIRSAQTTPLLARDGRLLGMISTHWTEPHEPSPRDLRLL
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEHHHCCCCCCCCCCCHHHHH
DILARQAADLLERTIADEALRERKEELDRTCAALRESEQLRKMLTGELSHRVKNMLATVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISTQTLRNCSDPAEFVESFSGRIQSMARVHSQLSTTDWKGTELRAVVEEGMKLGPVDEP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC
QIAASGPDIHLNANAVPKMAMILHELGTNARKYGALSRAGGTVDIRWTVRPGQLALSWTE
CEECCCCCEEECCCCHHHHHHHHHHHCCCHHHHCCHHCCCCEEEEEEEECCCCEEEEEEC
RGGPRVQAPVRRGFGSRLIEATVRGVHGNADMSIEAEGVRWEIQFPLPDDEDSAIEAGKR
CCCCEEEHHHHHCHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHH
RAGQGSLAEQAGLGPSRQPAWHNLAGKHVLVVEDEPLLALDIVGQLEDAGTIIVGPAADL
CCCCCCHHHHHCCCCCCCCCHHCCCCCEEEEECCCCEEEEHHHHHHCCCCEEEECCCHHH
RAALDLIAHHRIDIALLDANLSGEPVDDIAHALAARSIPFLFMSGYGRENLPPAFPHIEL
HHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
LSKPFDARQLLTLADRMLA
HCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA