Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550695
Identifier: 148550695
GI number: 148550695
Start: 149025
End: 149621
Strand: Reverse
Name: 148550695
Synonym: Swit_5259
Alternate gene names: NA
Gene position: 149621-149025 (Counterclockwise)
Preceding gene: 148550696
Following gene: 148550694
Centisome position: 48.23
GC content: 66.0
Gene sequence:
>597_bases ATGTCCCGCCATTCGATGGGCGGGCACGCAACCGCGAAAGCCTATCTCGACGACCAGTTCACCTATGAGCGCGACCATCC CGAAGGCGGCACGCGCGGCCTCAAGGTGCTCGCCTCGTCCTGCCCTGCAAACCGCGTCTATTATGCGGCCGCGCAAGTGA CGCGCGACGGCATCGGCGGCGAGGTCTTCGCCATCGTCTGCCTCGTCCTGTGGAATCCGCGCAGCGCGAACGGCGAAAAT TTTGGCTACAAGGACATGACGGAAAATATGGGCCCCTGCGAGGCTGCCTGTCCCGCCGCGATCCTCGATCTTCTGACACC GACCACCAACGCGCATGCGCTCGACTGGCGGCGTCGCTGCCGCGAGGCGCTCGCCCGCCGTTCCCGAAAGATCGAGACCG GCGCGCGCATCAAGCTGCCCGCGCCGGTCCGGTTTTCCGACGGGCATGTGGGCGAGGAATTCATCGTCGACCGGATCGGC CGCCGGGTCATCCTGCGCGATCCCGAGACGCGCATGCCCTACCGGATCAGCCGCTTCATGGACCAGGCCTGGACGATCGT CCCGGAGACCAAGGTCCACAAGACCCTCTTCGCCTGA
Upstream 100 bases:
>100_bases GGCTGCAGTTCGACCGCGACTGCGCGCCGATCGCCGAACTGCCGGTCTACGACTGGTAATCCCCTCTCATCCAAGGAGAA CCCTCATGGGTTGGCTCACC
Downstream 100 bases:
>100_bases GCGCTCTTGCCTCCCGTCCCTCCTGCGAAGACAAGGATCTGATCATGTTTCCTTTTCCCTTTCCCCGGTCCGCCAAGCGC GATCTCCTGTGCAGCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSRHSMGGHATAKAYLDDQFTYERDHPEGGTRGLKVLASSCPANRVYYAAAQVTRDGIGGEVFAIVCLVLWNPRSANGEN FGYKDMTENMGPCEAACPAAILDLLTPTTNAHALDWRRRCREALARRSRKIETGARIKLPAPVRFSDGHVGEEFIVDRIG RRVILRDPETRMPYRISRFMDQAWTIVPETKVHKTLFA
Sequences:
>Translated_198_residues MSRHSMGGHATAKAYLDDQFTYERDHPEGGTRGLKVLASSCPANRVYYAAAQVTRDGIGGEVFAIVCLVLWNPRSANGEN FGYKDMTENMGPCEAACPAAILDLLTPTTNAHALDWRRRCREALARRSRKIETGARIKLPAPVRFSDGHVGEEFIVDRIG RRVILRDPETRMPYRISRFMDQAWTIVPETKVHKTLFA >Mature_197_residues SRHSMGGHATAKAYLDDQFTYERDHPEGGTRGLKVLASSCPANRVYYAAAQVTRDGIGGEVFAIVCLVLWNPRSANGENF GYKDMTENMGPCEAACPAAILDLLTPTTNAHALDWRRRCREALARRSRKIETGARIKLPAPVRFSDGHVGEEFIVDRIGR RVILRDPETRMPYRISRFMDQAWTIVPETKVHKTLFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22221; Mature: 22089
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHSMGGHATAKAYLDDQFTYERDHPEGGTRGLKVLASSCPANRVYYAAAQVTRDGIGG CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHCCCCH EVFAIVCLVLWNPRSANGENFGYKDMTENMGPCEAACPAAILDLLTPTTNAHALDWRRRC HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH REALARRSRKIETGARIKLPAPVRFSDGHVGEEFIVDRIGRRVILRDPETRMPYRISRFM HHHHHHHHHCCCCCCEEECCCCCEECCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHH DQAWTIVPETKVHKTLFA HHHHCCCCCHHHHHHHCC >Mature Secondary Structure SRHSMGGHATAKAYLDDQFTYERDHPEGGTRGLKVLASSCPANRVYYAAAQVTRDGIGG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHCCCCH EVFAIVCLVLWNPRSANGENFGYKDMTENMGPCEAACPAAILDLLTPTTNAHALDWRRRC HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH REALARRSRKIETGARIKLPAPVRFSDGHVGEEFIVDRIGRRVILRDPETRMPYRISRFM HHHHHHHHHCCCCCCEEECCCCCEECCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHH DQAWTIVPETKVHKTLFA HHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA