Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550607
Identifier: 148550607
GI number: 148550607
Start: 63078
End: 63407
Strand: Reverse
Name: 148550607
Synonym: Swit_5168
Alternate gene names: NA
Gene position: 63407-63078 (Counterclockwise)
Preceding gene: 148550608
Following gene: 148550606
Centisome position: 20.44
GC content: 63.94
Gene sequence:
>330_bases ATGTTCACTCTCACCAGCTTCGACGACATCGCCGGAATCGCCCAGGGCGTCGAGATCACCAACCCCAACATGGTCGAGCG CATCCGCCGCGCGGCAGACAGCCTTAACCGCCACGAGATCGCCGCGCACCTCGGCCAGGCGATCACCGAGGCGACCGACG CCGCGCATGTCCGCGACTTCGAGGAAGTGCAGTTCGGCGAGGCGAGCGCCGATGCGATCGTCGATTGCGAATATTACGAA GATCTCGCCGCAGCCTGGTCGCTGATCGCCAGCGAGCATCAGCTGACCATTCCCCATTCCATCTTCGCGCACGACGGGTC GGTCCACTGA
Upstream 100 bases:
>100_bases TACAACACCGACATCGTCGCCGAGGAAATCGAGTTCCTCTGACCGTCTCCCGGGCGGTCGCTCGCGGCCGCCCTCCACCT TCCTTCAGATGGAGAGCAAG
Downstream 100 bases:
>100_bases CCCGTCACACGCCTTTCGAACGGAGTACCGTCATGATCAAACCTGCCCCTTCGAACACCGCCGCCGCCCATTGCTACGGC ATCGTCCTTCACCATCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MFTLTSFDDIAGIAQGVEITNPNMVERIRRAADSLNRHEIAAHLGQAITEATDAAHVRDFEEVQFGEASADAIVDCEYYE DLAAAWSLIASEHQLTIPHSIFAHDGSVH
Sequences:
>Translated_109_residues MFTLTSFDDIAGIAQGVEITNPNMVERIRRAADSLNRHEIAAHLGQAITEATDAAHVRDFEEVQFGEASADAIVDCEYYE DLAAAWSLIASEHQLTIPHSIFAHDGSVH >Mature_109_residues MFTLTSFDDIAGIAQGVEITNPNMVERIRRAADSLNRHEIAAHLGQAITEATDAAHVRDFEEVQFGEASADAIVDCEYYE DLAAAWSLIASEHQLTIPHSIFAHDGSVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11935; Mature: 11935
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLTSFDDIAGIAQGVEITNPNMVERIRRAADSLNRHEIAAHLGQAITEATDAAHVRDF CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EEVQFGEASADAIVDCEYYEDLAAAWSLIASEHQLTIPHSIFAHDGSVH HHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MFTLTSFDDIAGIAQGVEITNPNMVERIRRAADSLNRHEIAAHLGQAITEATDAAHVRDF CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EEVQFGEASADAIVDCEYYEDLAAAWSLIASEHQLTIPHSIFAHDGSVH HHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA