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The map label for this gene is nmoT [H]

Identifier: 148550578

GI number: 148550578

Start: 31820

End: 33226

Strand: Reverse

Name: nmoT [H]

Synonym: Swit_5139

Alternate gene names: 148550578

Gene position: 33226-31820 (Counterclockwise)

Preceding gene: 148550579

Following gene: 148550577

Centisome position: 10.71

GC content: 63.89

Gene sequence:

>1407_bases
ATGCAGCGGCATGACATGATCGAGGCGATGCGCGGGCTTGGGCTCAAGGGCATGGCGGGCGCGTTCGACGATGCGGTCAC
CACCGGCCTTCAGCGCCAGCGCACCACGATGGAGATACTGACCGACCTTCTGCGCGCGGAAGCAACACATCGCCATGCTG
CCTCGATCCGATACCGGATGGCGGCCGCCCGGCTGCCGGTCGTGAAGGATATCGATGCGTTCCGGTTCGAGGGCACGCCG
ATCAACGAGGGGCTGGTGCGTTCGCTGCACACTGCGGGAGATGCGCAGGCCGATTTCGGGGAAGCGCTGGTGGAGATCGG
CGGGGTGGAGCAGAAGGCCTACTTCTTCGCGCTCGATCTGCCGCACAGTGATGCCTGCTATGTGCGGGCCTATCCGGCGG
CGGTGGCGGAGGCCTGGGTGGACGGACACGTGCATGCCTTCGCGTTTTTCGGCGCGGTACCGCGCTCGATCGTCTATGAC
AACGATCGCTGCCTTGTGACGAAGATCCTGCCCGACGGCACGCGGCAGCGTGCCACGCTGTTCAGCGCTTTCCTGTCACA
TTACGTGATCCGCGACCGCTATGCTCGCCCGGGCAAGGGGAACGAGAAAGGCAATGTGGAGGGGCTGGTAGGCTATTGCC
GGCGCAACTTCATGGTGCCGATCCCGAAGTTCCCGACCTGGGAGGCGTTCAACCTGTGGCTGGAGGAGCAATGCCGCAAG
CGCCAGCAGGACAAGGTGCGCGGGCAGAGCGAGACGATCGGTGAGCGGCTGCAGCGCGATCTCGCGGCCATGCAGCCTCT
GCCCGCTACACCCTTCGAGGCCTGCGATCAGAAAGGCGGGAGGGTCTCCTCGCAATCCCTGGTGCGCTACAGGACCAACG
ATTATTCGGTTCCGGTGGCCTGGGGCCATCAGGAGGTCTGGATCAGGGCCTATGTCGATGAGGTGGTGATCGGCTGCCGC
AGCGAAGTCATCGCCCGTCATCCTCGTTGCTATGCCCGCGAGGAGGTTGTCTTCGACCCGCTCCATTATCTCCCGCTGAT
CGAGCAGAAGATCAACGCATTCGACCAGGCTGCGCCTTTGCAGGGCTGGGACCTGCCCGAAGCGTTCACGACACTGCAGC
GGTTGATGGAAGGGCGCATGCACAAACATGGCAGGCGCGAATATGTGCAGGTACTGCGCCTGCTGGAAACGTTCACCCTC
GCCGATCTCCAGGCGGCGGTCGAACAGGCCATCGATCTTGGCGCCATCGGCTTCGATGCCGTCAAGCACCTCGTCCTGTG
CCGGATCGAACGCGTACCGCCCAGGCTGGACCTGGACGTCTATCCCTTCCTGCCACGCACCACGGTCGAGAAGACCTTTG
CCAGAGCCTATCTGAGCCTGCTCTCCGACCGGCAGGAGGCCGCATGA

Upstream 100 bases:

>100_bases
GAACCGCCGCGACCGCTCACCATCATCACCTCCGAAGACAGCGCCTTGCGCCATCCGCCGATCGCCGACTGCGCCCGTTA
CGACCAGCTGAGGACCTTCG

Downstream 100 bases:

>100_bases
GCGATCAGGCCCCGGAGATCCTTCTCGCTCACCATCTCAAGGCGCTCAAGCTGCCTACGTGCCTGCGTGAGCATCACAAG
CTCGCGCGGCAATGTGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHTAGDAQADFGEALVEIGGVEQKAYFFALDLPHSDACYVRAYPAAVAEAWVDGHVHAFAFFGAVPRSIVYD
NDRCLVTKILPDGTRQRATLFSAFLSHYVIRDRYARPGKGNEKGNVEGLVGYCRRNFMVPIPKFPTWEAFNLWLEEQCRK
RQQDKVRGQSETIGERLQRDLAAMQPLPATPFEACDQKGGRVSSQSLVRYRTNDYSVPVAWGHQEVWIRAYVDEVVIGCR
SEVIARHPRCYAREEVVFDPLHYLPLIEQKINAFDQAAPLQGWDLPEAFTTLQRLMEGRMHKHGRREYVQVLRLLETFTL
ADLQAAVEQAIDLGAIGFDAVKHLVLCRIERVPPRLDLDVYPFLPRTTVEKTFARAYLSLLSDRQEAA

Sequences:

>Translated_468_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHTAGDAQADFGEALVEIGGVEQKAYFFALDLPHSDACYVRAYPAAVAEAWVDGHVHAFAFFGAVPRSIVYD
NDRCLVTKILPDGTRQRATLFSAFLSHYVIRDRYARPGKGNEKGNVEGLVGYCRRNFMVPIPKFPTWEAFNLWLEEQCRK
RQQDKVRGQSETIGERLQRDLAAMQPLPATPFEACDQKGGRVSSQSLVRYRTNDYSVPVAWGHQEVWIRAYVDEVVIGCR
SEVIARHPRCYAREEVVFDPLHYLPLIEQKINAFDQAAPLQGWDLPEAFTTLQRLMEGRMHKHGRREYVQVLRLLETFTL
ADLQAAVEQAIDLGAIGFDAVKHLVLCRIERVPPRLDLDVYPFLPRTTVEKTFARAYLSLLSDRQEAA
>Mature_468_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHTAGDAQADFGEALVEIGGVEQKAYFFALDLPHSDACYVRAYPAAVAEAWVDGHVHAFAFFGAVPRSIVYD
NDRCLVTKILPDGTRQRATLFSAFLSHYVIRDRYARPGKGNEKGNVEGLVGYCRRNFMVPIPKFPTWEAFNLWLEEQCRK
RQQDKVRGQSETIGERLQRDLAAMQPLPATPFEACDQKGGRVSSQSLVRYRTNDYSVPVAWGHQEVWIRAYVDEVVIGCR
SEVIARHPRCYAREEVVFDPLHYLPLIEQKINAFDQAAPLQGWDLPEAFTTLQRLMEGRMHKHGRREYVQVLRLLETFTL
ADLQAAVEQAIDLGAIGFDAVKHLVLCRIERVPPRLDLDVYPFLPRTTVEKTFARAYLSLLSDRQEAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 53017; Mature: 53017

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRM
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARLPVVKDIDAFRFEGTPINEGLVRSLHTAGDAQADFGEALVEIGGVEQKAYFFALDL
HHHHCCCHHCCHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEEC
PHSDACYVRAYPAAVAEAWVDGHVHAFAFFGAVPRSIVYDNDRCLVTKILPDGTRQRATL
CCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCCEEEEEECCCCCHHHHHH
FSAFLSHYVIRDRYARPGKGNEKGNVEGLVGYCRRNFMVPIPKFPTWEAFNLWLEEQCRK
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH
RQQDKVRGQSETIGERLQRDLAAMQPLPATPFEACDQKGGRVSSQSLVRYRTNDYSVPVA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHEECCCCEEEEE
WGHQEVWIRAYVDEVVIGCRSEVIARHPRCYAREEVVFDPLHYLPLIEQKINAFDQAAPL
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCC
QGWDLPEAFTTLQRLMEGRMHKHGRREYVQVLRLLETFTLADLQAAVEQAIDLGAIGFDA
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VKHLVLCRIERVPPRLDLDVYPFLPRTTVEKTFARAYLSLLSDRQEAA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRM
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARLPVVKDIDAFRFEGTPINEGLVRSLHTAGDAQADFGEALVEIGGVEQKAYFFALDL
HHHHCCCHHCCHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEEC
PHSDACYVRAYPAAVAEAWVDGHVHAFAFFGAVPRSIVYDNDRCLVTKILPDGTRQRATL
CCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCCEEEEEECCCCCHHHHHH
FSAFLSHYVIRDRYARPGKGNEKGNVEGLVGYCRRNFMVPIPKFPTWEAFNLWLEEQCRK
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH
RQQDKVRGQSETIGERLQRDLAAMQPLPATPFEACDQKGGRVSSQSLVRYRTNDYSVPVA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHEECCCCEEEEE
WGHQEVWIRAYVDEVVIGCRSEVIARHPRCYAREEVVFDPLHYLPLIEQKINAFDQAAPL
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCC
QGWDLPEAFTTLQRLMEGRMHKHGRREYVQVLRLLETFTLADLQAAVEQAIDLGAIGFDA
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VKHLVLCRIERVPPRLDLDVYPFLPRTTVEKTFARAYLSLLSDRQEAA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]