Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is dinJ [C]
Identifier: 148550557
GI number: 148550557
Start: 3311
End: 3577
Strand: Reverse
Name: dinJ [C]
Synonym: Swit_5118
Alternate gene names: 148550557
Gene position: 3577-3311 (Counterclockwise)
Preceding gene: 148550561
Following gene: 148550556
Centisome position: 1.15
GC content: 64.04
Gene sequence:
>267_bases ATGGCTGTTTCCGACACCTATGTCCGCGCCAGGATCGACAATACGACGAAGGAACGCGCCACCGCCGCGCTGGGCGCGAT GGGCCTTTCGATCTCCGACGCTATCCGACTGTTGATGCTGCGTATCGCCGACGAACGGCGCTTGCCTTTCGAGGTCAAGG TTCCGAACGCCGCGACACGCGAGGCAATGGCAGAGCTGGCGGCGGGGAAGGGGACCAAGTTCGCCAGCGTCGATGCGCTG ATGGCGGACCTCCGTGCGGACGATTGA
Upstream 100 bases:
>100_bases CCACGATGCCGCGTCAGCGGCAGGCGCATAATCACCGCACCCATTGCCAAAATCAGATTTTGTGACTACGTTGGGACTAC GTTTTCAGAAGGAAATCCCA
Downstream 100 bases:
>100_bases TCGTTCGACCCGGTTCAAGCGCGACTACAAGCGGGAATCAAAGGGCCGGCATCGAGCGACCCTCGATGCCGATCTTCTGC CTGTCCTGGCCGCGCTCGCG
Product: addiction module antitoxin
Products: NA
Alternate protein names: Addiction Module Antitoxin RelB/DinJ Family; Addiction Module Antitoxin; RelB Antitoxin; DNA-Damage-Inducible Protein; Damage Inducible-Like Protein
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDAL MADLRADD
Sequences:
>Translated_88_residues MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDAL MADLRADD >Mature_87_residues AVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDALM ADLRADD
Specific function: Unknown
COG id: COG3077
COG function: function code L; DNA-damage-inducible protein J
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9468; Mature: 9337
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATR CCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHH EAMAELAAGKGTKFASVDALMADLRADD HHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATR CCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHH EAMAELAAGKGTKFASVDALMADLRADD HHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA