| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is nudH [C]
Identifier: 148380788
GI number: 148380788
Start: 3001344
End: 3001781
Strand: Reverse
Name: nudH [C]
Synonym: CBO2829
Alternate gene names: 148380788
Gene position: 3001781-3001344 (Counterclockwise)
Preceding gene: 148380791
Following gene: 148380787
Centisome position: 77.23
GC content: 36.07
Gene sequence:
>438_bases ATGGGACAAGTTAAAGAGATTTGTCCAGGAGTAGCTATTGTAATTTTTAACGACAAGAAGCAAGTTTTGTTACAGAAAAG ATCAGATGTGTATCTTTGGGGTATACCTTCAGGTCATGTAGAACCAGGAGAAACAGTAACCAATGCTGCAATAAGAGAGG TACTTGAGGAGACTGGATTAGATGTAGAGGTAGTACGCTTTATTGGAGTATATTCTGATCCAGAGTCTCAAATTTTTGAG TACCCAGATGGAAGAATAACTCATTTTGTAACTTGTTGTTTTCAAGCAAAAATAATAGGCGGAGAGATTTCCTGTAGGTC TTCGGAAACTTTAGACTTAAAATTTTTTCCTATAGATGAATTACCTATAGATATAGTAAAGATGCATCCTGATTGGTTAA AGGATGCACTGGCTAATGAGGGACCTTATATTCGATAA
Upstream 100 bases:
>100_bases TGGAATAAAATGCCCGAGGGGGAAGGTTCAGCGTGTTTTTCATACGCTGAATTTTTATCTTCTCGGGTTTTTATATTTTA AAATAAAGGAGGAGATATTT
Downstream 100 bases:
>100_bases AATATACAAAAGTATTTCTGTGTTAAGTATTTAGAGTGTTAAAAACATATAAAGATAATTTAGATGAAGTTTTTTTAGGT GTTTTATAATTTTTATAATT
Product: MutT/nudix family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGQVKEICPGVAIVIFNDKKQVLLQKRSDVYLWGIPSGHVEPGETVTNAAIREVLEETGLDVEVVRFIGVYSDPESQIFE YPDGRITHFVTCCFQAKIIGGEISCRSSETLDLKFFPIDELPIDIVKMHPDWLKDALANEGPYIR
Sequences:
>Translated_145_residues MGQVKEICPGVAIVIFNDKKQVLLQKRSDVYLWGIPSGHVEPGETVTNAAIREVLEETGLDVEVVRFIGVYSDPESQIFE YPDGRITHFVTCCFQAKIIGGEISCRSSETLDLKFFPIDELPIDIVKMHPDWLKDALANEGPYIR >Mature_144_residues GQVKEICPGVAIVIFNDKKQVLLQKRSDVYLWGIPSGHVEPGETVTNAAIREVLEETGLDVEVVRFIGVYSDPESQIFEY PDGRITHFVTCCFQAKIIGGEISCRSSETLDLKFFPIDELPIDIVKMHPDWLKDALANEGPYIR
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006357 - InterPro: IPR023215 - InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 16296; Mature: 16165
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVKEICPGVAIVIFNDKKQVLLQKRSDVYLWGIPSGHVEPGETVTNAAIREVLEETGL CCCCHHHCCCEEEEEECCCHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC DVEVVRFIGVYSDPESQIFEYPDGRITHFVTCCFQAKIIGGEISCRSSETLDLKFFPIDE CEEEEEEEECCCCCHHHEEECCCCCHHHHHHHHHHEEEECCEEEECCCCEEEEEEEECCC LPIDIVKMHPDWLKDALANEGPYIR CCEEEEEECHHHHHHHHCCCCCCCC >Mature Secondary Structure GQVKEICPGVAIVIFNDKKQVLLQKRSDVYLWGIPSGHVEPGETVTNAAIREVLEETGL CCCHHHCCCEEEEEECCCHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC DVEVVRFIGVYSDPESQIFEYPDGRITHFVTCCFQAKIIGGEISCRSSETLDLKFFPIDE CEEEEEEEECCCCCHHHEEECCCCCHHHHHHHHHHEEEECCEEEECCCCEEEEEEEECCC LPIDIVKMHPDWLKDALANEGPYIR CCEEEEEECHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631946 [H]