Click here to switch to the map view.

The map label for this gene is yvaQ [H]

Identifier: 148380787

GI number: 148380787

Start: 2998920

End: 3000632

Strand: Reverse

Name: yvaQ [H]

Synonym: CBO2828

Alternate gene names: 148380787

Gene position: 3000632-2998920 (Counterclockwise)

Preceding gene: 148380788

Following gene: 148380786

Centisome position: 77.2

GC content: 30.88

Gene sequence:

>1713_bases
ATGTTAAAGAATATAAAAAAGAAAGTGAAAACACAACTAATTTCTGCTTTTTTAATAGTAGCTCTACTTATTGCTATAGT
AGGTGCTGTAGGTGGAATAGCTCTTAAAAATGTAGCTAAATATGGTGAAAAAATGTATAGTACTGATTTGCAATCTGTTT
ATATGATTACTGATATGAAACAAAACTTGACAGAAATAAAAGGTGATATATTACAGTTAATATATGAAAAAAATAAATCT
AAGAAGACAGAATTGATAAAGAATATTGAGAAAAATCAAGATGAAAATAGCAAATATCTTATTGAGTATGATAAATTACC
AGGGACTGATGAAGAAAATAAAAAATTTGAAGTTTTTAAAGGTCAATTAAATCAATATAGAACATTAAGAGAAGATGTTA
TGAAATTAGTAGAAAATAATAATTATACTCAAGCAGAAGAGAAATATAAAGAAATATCAAAAGTTAGAGATGATATGTTT
GAGAGTATAGATAAAATAATTGAAATAAATTTAAACTCGGCTGAATTATCACATGATGATATTAATTCTATTTATGCTAA
ATCTAATATGATTATTGCTATTTTAAGTATAGTTGGTCTTTTAATGGCAATTTTCATAGGATTACTTATTGCAAAAAATA
TAGCAAAGCCTCTTAATAAAATAAAAAATTTAGCAGAGAGATTAGCAAATTACGATTTTTCAACTTCCATTGCAATTACA
AGAGTAGATGAATTTGGACAAACAGCTGTAGCTTTAAATATCGCGCAGGAAAATGTGAATGGATTAGTTAAGATAATTAT
GGAGAATTCACAGGATATAAGTGCCTCTTCTGAAGAGCTTTCAGCTACTGTAGAGGAATTATCATCAAAGGTGGAAACCA
TAGATACTGCAATAAATAATATTGCAGCAAGCATGCAGGAGTCTAGTGCTGCATCGGAAGAAATTAGCGCATCCGTTGAA
GAAGTAGATTCAAGTGCCAATGAACTATCACAAAAGGCTATGGAAGGAAGCAATAATTCAAATCAATTTAAAGAAAGGGC
TACAGAAGTCAAAAAGAATAGCCAAAAAGCTATAGAAGAATCACGAAAAATACACTTAGAAAAGAAAAGCAATATGGAAA
GGGCTGTTGAAGAAGGTAGAGTCGTTGATAGTATCAAGGTTATGGCAGACACTATAGCAAGTATTGCAGAACAGACTAAT
TTACTTGCTCTAAATGCAGCAATAGAAGCAGCACGAGCAGGAGAACAGGGAAAAGGCTTTGCGGTAGTAGCAGAAGAAGT
AAGAAGTCTTGCAGAACAGTCAAAAGATGCTGTAGTAAGCATTCAAGAGACTATAATTAAGGTGCAAAATGCATTTAAAA
GTAGTATTGATACAGGTAGTGATATATTAAAATTTATAAATACACAAGTAATGGAACAATTTGATGCTTATGGAGAAACA
GGTGGTCAATATTATGATGATTCTGATTTTGTAAGCAAAATGTCTGAGGAAATTGCAGCCATGTCTGAACAAGTTACAGC
AACATTAGGACAAGTAAGTGGAGCAGTGCAGAATATGGCAATATCTGCTCAAAAGTCTAATGAGGAAGCAGATATAATAA
AAGATAGCATGAACGAAACAACTAAAGCTATAGAACAAGTAGCAGAAACGGCCCAAAGTCAAGCAGAACTTGCTCAAAAT
TTAAATGAAATGGTGCATAAATTTAAAATATAA

Upstream 100 bases:

>100_bases
AAGAAAACTAAAGAAATTATATAAAAATTTAACAATAAAGAGAATATTGATGTTTTTGCAAACTTAAATTCATAATAACT
TGATGAGGAGAAGGTGAACT

Downstream 100 bases:

>100_bases
GTTTAAAAATTTTCCACCCATAATAAAATATTATTTTCAAGTATATTCCAATAAAGTATAATAATATATTAATTTAAATG
ATTGCATGCCTTAAATTGAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MLKNIKKKVKTQLISAFLIVALLIAIVGAVGGIALKNVAKYGEKMYSTDLQSVYMITDMKQNLTEIKGDILQLIYEKNKS
KKTELIKNIEKNQDENSKYLIEYDKLPGTDEENKKFEVFKGQLNQYRTLREDVMKLVENNNYTQAEEKYKEISKVRDDMF
ESIDKIIEINLNSAELSHDDINSIYAKSNMIIAILSIVGLLMAIFIGLLIAKNIAKPLNKIKNLAERLANYDFSTSIAIT
RVDEFGQTAVALNIAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRSLAEQSKDAVVSIQETIIKVQNAFKSSIDTGSDILKFINTQVMEQFDAYGET
GGQYYDDSDFVSKMSEEIAAMSEQVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAQSQAELAQN
LNEMVHKFKI

Sequences:

>Translated_570_residues
MLKNIKKKVKTQLISAFLIVALLIAIVGAVGGIALKNVAKYGEKMYSTDLQSVYMITDMKQNLTEIKGDILQLIYEKNKS
KKTELIKNIEKNQDENSKYLIEYDKLPGTDEENKKFEVFKGQLNQYRTLREDVMKLVENNNYTQAEEKYKEISKVRDDMF
ESIDKIIEINLNSAELSHDDINSIYAKSNMIIAILSIVGLLMAIFIGLLIAKNIAKPLNKIKNLAERLANYDFSTSIAIT
RVDEFGQTAVALNIAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRSLAEQSKDAVVSIQETIIKVQNAFKSSIDTGSDILKFINTQVMEQFDAYGET
GGQYYDDSDFVSKMSEEIAAMSEQVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAQSQAELAQN
LNEMVHKFKI
>Mature_570_residues
MLKNIKKKVKTQLISAFLIVALLIAIVGAVGGIALKNVAKYGEKMYSTDLQSVYMITDMKQNLTEIKGDILQLIYEKNKS
KKTELIKNIEKNQDENSKYLIEYDKLPGTDEENKKFEVFKGQLNQYRTLREDVMKLVENNNYTQAEEKYKEISKVRDDMF
ESIDKIIEINLNSAELSHDDINSIYAKSNMIIAILSIVGLLMAIFIGLLIAKNIAKPLNKIKNLAERLANYDFSTSIAIT
RVDEFGQTAVALNIAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRSLAEQSKDAVVSIQETIIKVQNAFKSSIDTGSDILKFINTQVMEQFDAYGET
GGQYYDDSDFVSKMSEEIAAMSEQVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAQSQAELAQN
LNEMVHKFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=415, Percent_Identity=27.710843373494, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI2367378, Length=545, Percent_Identity=24.5871559633028, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788195, Length=310, Percent_Identity=31.2903225806452, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788194, Length=280, Percent_Identity=30.7142857142857, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789453, Length=550, Percent_Identity=24, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62972; Mature: 62972

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIKKKVKTQLISAFLIVALLIAIVGAVGGIALKNVAKYGEKMYSTDLQSVYMITDMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNLTEIKGDILQLIYEKNKSKKTELIKNIEKNQDENSKYLIEYDKLPGTDEENKKFEVFK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHH
GQLNQYRTLREDVMKLVENNNYTQAEEKYKEISKVRDDMFESIDKIIEINLNSAELSHDD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
INSIYAKSNMIIAILSIVGLLMAIFIGLLIAKNIAKPLNKIKNLAERLANYDFSTSIAIT
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RVDEFGQTAVALNIAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINN
EHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAASMQESSAASEEISASVEEVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTNLLALNAAIEAARAGEQGKGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVAEEVRSLAEQSKDAVVSIQETIIKVQNAFKSSIDTGSDILKFINTQVMEQFDAYGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GGQYYDDSDFVSKMSEEIAAMSEQVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKAIEQVAETAQSQAELAQNLNEMVHKFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNIKKKVKTQLISAFLIVALLIAIVGAVGGIALKNVAKYGEKMYSTDLQSVYMITDMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNLTEIKGDILQLIYEKNKSKKTELIKNIEKNQDENSKYLIEYDKLPGTDEENKKFEVFK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHH
GQLNQYRTLREDVMKLVENNNYTQAEEKYKEISKVRDDMFESIDKIIEINLNSAELSHDD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
INSIYAKSNMIIAILSIVGLLMAIFIGLLIAKNIAKPLNKIKNLAERLANYDFSTSIAIT
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RVDEFGQTAVALNIAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINN
EHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAASMQESSAASEEISASVEEVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTNLLALNAAIEAARAGEQGKGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVAEEVRSLAEQSKDAVVSIQETIIKVQNAFKSSIDTGSDILKFINTQVMEQFDAYGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GGQYYDDSDFVSKMSEEIAAMSEQVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKAIEQVAETAQSQAELAQNLNEMVHKFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]