| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380766
Identifier: 148380766
GI number: 148380766
Start: 2971113
End: 2971523
Strand: Reverse
Name: 148380766
Synonym: CBO2806
Alternate gene names: NA
Gene position: 2971523-2971113 (Counterclockwise)
Preceding gene: 148380768
Following gene: 148380765
Centisome position: 76.45
GC content: 26.76
Gene sequence:
>411_bases ATGGAAAAATTAAAAGTTTTAGTTCCAGTGGATTCATCTGAAAGAAGCAATTATTCTTTAAATTTATTAGAAAACATGTT TGATAAAAATCAGGTGGAAGTTACTTTAATAAATGTTAAAGAAGTTCAAGTAAATAATATTTTTTTAATTCAACAACAAA TAAAAAAACTTAAGGACAAAAGTGAAAAGATCATGAAGGAAGCAAAGCAAAAGATCAAAAATCTTGGATATGAATATGAA ATGTATTCCTGTTTTGGTATGCCAGCGGATAAAATAGTAGAAAAAGCAGAAAAAGATAATTTTGATATGATAGTTATGGC TAAATCTAATAAAAAAGGCCTAGAAAAGATAAAAGGTTCTGTAACGACTAAAGTAGTTAAAACTTCTGAAGTGCCAGTAA TTGTCGTTTAG
Upstream 100 bases:
>100_bases TGCTTATAATATGTTAATATAATAACAAAGATATTGTTAATAATATAACAAATAGCTTTCATCTAAATTTTAGTATTATT ATATAAAGAGGTGTATTAAA
Downstream 100 bases:
>100_bases AATAAATTAAGCTCTTATTTTTTAAATTATTAAAATAAAAACATTATGAAGTTAGTTTTAAATTAATTTCATAATGTTTT TTAATTTAGAACTAAATCTT
Product: universal stress protein family protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein Family Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEKLKVLVPVDSSERSNYSLNLLENMFDKNQVEVTLINVKEVQVNNIFLIQQQIKKLKDKSEKIMKEAKQKIKNLGYEYE MYSCFGMPADKIVEKAEKDNFDMIVMAKSNKKGLEKIKGSVTTKVVKTSEVPVIVV
Sequences:
>Translated_136_residues MEKLKVLVPVDSSERSNYSLNLLENMFDKNQVEVTLINVKEVQVNNIFLIQQQIKKLKDKSEKIMKEAKQKIKNLGYEYE MYSCFGMPADKIVEKAEKDNFDMIVMAKSNKKGLEKIKGSVTTKVVKTSEVPVIVV >Mature_136_residues MEKLKVLVPVDSSERSNYSLNLLENMFDKNQVEVTLINVKEVQVNNIFLIQQQIKKLKDKSEKIMKEAKQKIKNLGYEYE MYSCFGMPADKIVEKAEKDNFDMIVMAKSNKKGLEKIKGSVTTKVVKTSEVPVIVV
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15605; Mature: 15605
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKVLVPVDSSERSNYSLNLLENMFDKNQVEVTLINVKEVQVNNIFLIQQQIKKLKDK CCCEEEEEECCCCCCCCEEHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEHHHHHHHHHH SEKIMKEAKQKIKNLGYEYEMYSCFGMPADKIVEKAEKDNFDMIVMAKSNKKGLEKIKGS HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCC VTTKVVKTSEVPVIVV HHEEEEEECCCCEEEC >Mature Secondary Structure MEKLKVLVPVDSSERSNYSLNLLENMFDKNQVEVTLINVKEVQVNNIFLIQQQIKKLKDK CCCEEEEEECCCCCCCCEEHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEHHHHHHHHHH SEKIMKEAKQKIKNLGYEYEMYSCFGMPADKIVEKAEKDNFDMIVMAKSNKKGLEKIKGS HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCC VTTKVVKTSEVPVIVV HHEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA