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The map label for this gene is gerAA [H]

Identifier: 148380757

GI number: 148380757

Start: 2961990

End: 2963477

Strand: Reverse

Name: gerAA [H]

Synonym: CBO2797

Alternate gene names: 148380757

Gene position: 2963477-2961990 (Counterclockwise)

Preceding gene: 148380758

Following gene: 148380756

Centisome position: 76.24

GC content: 28.76

Gene sequence:

>1488_bases
ATGAGAGATAAGTTAGATAATAAAATACAACCTATTCTAGATAAACTTAATGCTCCAGATAAATTTAATGTAAAAAAAAT
AAATTTAGGTAAAGGAAATAATATAAAGGTAGCATTAGTTTATGATAAAGATTTAATAGATAGAAATATAATAAGTGACT
ACATATTAAAACCATTAATGCTCCATGTAGAGGAAAGTTTTACTGGTAAAGAAAATATTACAGAAATTTTAATGGAAAAA
TATATATGTGTAGATGACACTATTATAAAAACAGATAATGAAGAAATAACAGATTTCATAAAAAAAGGATCTACAGCAAT
TTTTGTTCCTAATAGTGAAAATACTATAATTATTAATACTGTTAAAAAAAATTATAAATCTATAATTCCACCGGAAATAG
AAACTTCTATAAGGGGACCTAAGGAAGCCTTTACAGAAGGTATAGAGAATAATTTATCCCAAATTAATAGAAGAATAAAG
GATAAAAATTTAAGAATCGAAAGATTTATAATCGGTGTAAGATCACAAACAGAAGTAGCAATGGTATATATAGAAGATAT
AGCAGATGAGAAGATAGTGAATGAGATGAGGAAAAGATTAAATTTAATAAAAGTAGATCATATAAAAACTGTAGCCTATA
TAGAACAGTATATGCAAAATAATACTTACACTATATTTCCACAGTTTTTTACTACAGAAAGACCGGATGTATTTGAAGCT
AGTATTATAGAAGGAAGAGTTGGCATATTGATGGAAGGAACGGAGCAAGGTATAACTGCACCAGCTATTTTTACAGAATT
TTTTCAAACTGTAGAAGATTACAATCAAACATTTATGTTATCAACAGTTATAAGACTTTTTAGAGTAATAGCTGTAATTT
TAGTGTTAAGTCTAACCCCTATATATTTAACATTTATAAAATTTAATGTGGAATTACTGCCAGATAAATTATTACAACCT
ATTATACAATCTAGAGTTGGTATTGCCTTGAATCCAATCATGGAAATAATTTCAATGGAGCTTATAGTAGAATTTTTGAG
AGAAGGAGGATTAAGATTGCCCTCAAAAATAGGGCAAACTCTAAGTGTGGTTGGTGGTATTATAATTGGAGATGCTGCTA
TAAAATCTCACCTTGTAAGCTCTACCACCCTTTTAGTAGTAGGTGTCTCTACAGTGGCTACCTTTCTTATTCCTAATTAT
GAAATGTCATTAGCTATTAGGATATTAAAATTTCCTATATTGTTTCTAACCAATGCTTTGGGCATAATAGGAGTTTCTAT
AGGATGGTTTTTTATATTGCTTGAATTATGTTCTTTGGACAGTATAGGGGTTCCTTATCTTCAGTTTAAAAAATCTGATA
TGAAGGATATATTCATGAGAGCCCCTTTGTGGAAAATGAATAAAAGACCAAAGGCAATACCGAACAAAAATCCTGTACGC
CAAGAGGATTTTAGAAAAAAATTTAGGGGGAACAACAATGGAAAATAG

Upstream 100 bases:

>100_bases
TATAAATAAATAGGTATCCTATTAATAATATAATTAAATTTTGTGATTTAGCACATAATATATGATAACTATATATAAAT
CATATAAGAAAGGGTAAAAA

Downstream 100 bases:

>100_bases
CAGAAATAATGTTTTAACTACAAGTCAAACTATAGTTATTATAGTAGGATCTATGCTAGGAATAGGGATATTATCTCTTC
CAGCTAATTTAAGTAAGATA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MRDKLDNKIQPILDKLNAPDKFNVKKINLGKGNNIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVKKNYKSIIPPEIETSIRGPKEAFTEGIENNLSQINRRIK
DKNLRIERFIIGVRSQTEVAMVYIEDIADEKIVNEMRKRLNLIKVDHIKTVAYIEQYMQNNTYTIFPQFFTTERPDVFEA
SIIEGRVGILMEGTEQGITAPAIFTEFFQTVEDYNQTFMLSTVIRLFRVIAVILVLSLTPIYLTFIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLAIRILKFPILFLTNALGIIGVSIGWFFILLELCSLDSIGVPYLQFKKSDMKDIFMRAPLWKMNKRPKAIPNKNPVR
QEDFRKKFRGNNNGK

Sequences:

>Translated_495_residues
MRDKLDNKIQPILDKLNAPDKFNVKKINLGKGNNIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVKKNYKSIIPPEIETSIRGPKEAFTEGIENNLSQINRRIK
DKNLRIERFIIGVRSQTEVAMVYIEDIADEKIVNEMRKRLNLIKVDHIKTVAYIEQYMQNNTYTIFPQFFTTERPDVFEA
SIIEGRVGILMEGTEQGITAPAIFTEFFQTVEDYNQTFMLSTVIRLFRVIAVILVLSLTPIYLTFIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLAIRILKFPILFLTNALGIIGVSIGWFFILLELCSLDSIGVPYLQFKKSDMKDIFMRAPLWKMNKRPKAIPNKNPVR
QEDFRKKFRGNNNGK
>Mature_495_residues
MRDKLDNKIQPILDKLNAPDKFNVKKINLGKGNNIKVALVYDKDLIDRNIISDYILKPLMLHVEESFTGKENITEILMEK
YICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINTVKKNYKSIIPPEIETSIRGPKEAFTEGIENNLSQINRRIK
DKNLRIERFIIGVRSQTEVAMVYIEDIADEKIVNEMRKRLNLIKVDHIKTVAYIEQYMQNNTYTIFPQFFTTERPDVFEA
SIIEGRVGILMEGTEQGITAPAIFTEFFQTVEDYNQTFMLSTVIRLFRVIAVILVLSLTPIYLTFIKFNVELLPDKLLQP
IIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQTLSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNY
EMSLAIRILKFPILFLTNALGIIGVSIGWFFILLELCSLDSIGVPYLQFKKSDMKDIFMRAPLWKMNKRPKAIPNKNPVR
QEDFRKKFRGNNNGK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56415; Mature: 56415

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKLDNKIQPILDKLNAPDKFNVKKINLGKGNNIKVALVYDKDLIDRNIISDYILKPLM
CCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
LHVEESFTGKENITEILMEKYICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINT
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEE
VKKNYKSIIPPEIETSIRGPKEAFTEGIENNLSQINRRIKDKNLRIERFIIGVRSQTEVA
CHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEE
MVYIEDIADEKIVNEMRKRLNLIKVDHIKTVAYIEQYMQNNTYTIFPQFFTTERPDVFEA
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHH
SIIEGRVGILMEGTEQGITAPAIFTEFFQTVEDYNQTFMLSTVIRLFRVIAVILVLSLTP
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLTFIKFNVELLPDKLLQPIIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQT
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNYEMSLAIRILKFPILFLTNAL
HHHHHHHHCCHHHHHHHHHCCHHHEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GIIGVSIGWFFILLELCSLDSIGVPYLQFKKSDMKDIFMRAPLWKMNKRPKAIPNKNPVR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCC
QEDFRKKFRGNNNGK
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MRDKLDNKIQPILDKLNAPDKFNVKKINLGKGNNIKVALVYDKDLIDRNIISDYILKPLM
CCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
LHVEESFTGKENITEILMEKYICVDDTIIKTDNEEITDFIKKGSTAIFVPNSENTIIINT
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEE
VKKNYKSIIPPEIETSIRGPKEAFTEGIENNLSQINRRIKDKNLRIERFIIGVRSQTEVA
CHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEE
MVYIEDIADEKIVNEMRKRLNLIKVDHIKTVAYIEQYMQNNTYTIFPQFFTTERPDVFEA
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHH
SIIEGRVGILMEGTEQGITAPAIFTEFFQTVEDYNQTFMLSTVIRLFRVIAVILVLSLTP
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLTFIKFNVELLPDKLLQPIIQSRVGIALNPIMEIISMELIVEFLREGGLRLPSKIGQT
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LSVVGGIIIGDAAIKSHLVSSTTLLVVGVSTVATFLIPNYEMSLAIRILKFPILFLTNAL
HHHHHHHHCCHHHHHHHHHCCHHHEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GIIGVSIGWFFILLELCSLDSIGVPYLQFKKSDMKDIFMRAPLWKMNKRPKAIPNKNPVR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCC
QEDFRKKFRGNNNGK
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]