| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380748
Identifier: 148380748
GI number: 148380748
Start: 2951530
End: 2952606
Strand: Reverse
Name: 148380748
Synonym: CBO2788
Alternate gene names: NA
Gene position: 2952606-2951530 (Counterclockwise)
Preceding gene: 148380749
Following gene: 148380747
Centisome position: 75.96
GC content: 27.11
Gene sequence:
>1077_bases ATGAAAAGCTTGTTTAAAGATCCCTTGTTTTATAAAGAGTGGAAGAGTAGTAAATGGATTTGTTTACTTATGACTTTAAT TTTATTTTGGGATAAGCCTCGGACTGCTTCTGAGACATTAAGCTCCCTAAAATATCAAATGCTTATGGATAAAACCTTTG TATTCGATAAAATGTGGTTTAATCAGCTTTTATTAGGGTGGAGTAATGGGAAAAATATACTTGTTCTAGGAGTAATAGTA TTACTTTGTATATTATTATTTAAAGGGGAAAAACAGGATTCTACCTGTGATTTGTTACATTCTATGCCTTTTACAAGAAA GGATATAATGGTATCTAAAATTAAAGTAGGAATTTTAACTATAAGTATAGCATTTTTAATTAATTTTATAATACTAACAT TTTTTTATTTTAATAATAAATCCCAAATAGGAAGTTCCTATTTGGATATACCTAAGTTTTATTCTATAAATTTATTATTT TCTTTATTCTTTTTTATGTTTTTAGTTTTTATGCAAAGTATGGTGGGGCAATATTTCGCAGCAGCTATAATCGCACCAAT AACTTTATTTGTACCAAATATGTTTGCATCTTATATAGTTGATTTAATAAGATTAGGTAAAGGGCTAGGGTATGATAGTC CTAAATTAATGGCATTAGATCAATCAGTTAGAAATTCAAATATATATGATATAGTGAATACTTATGCAATAGATAGAATG GAAAAGGGGCCAGATGGAGAACAAATAGGTCATATTGATAGATTTATATATGAAAACTTTGATATTAAAATAATGATACT TATAATTTTAATAGTAGTGTTTGCTGTTTTAGCGGTAATTATATATAACAGGGTTAAACTAGAGAGAATAAATAAATTAA TAATATTCAAACCCGTTGAAACAGTATTTAAATTAGGGGTAGGTATATGTATAGGAATGATTTTTTCGCAAATATTTGGA TATCCAAAGGGGCAAGAACCAGTTGCCAATATGCCACTAATATATATAACTCTATTAATAGGTACAGTTATAGGATATTT TATAGCGAAACTAGTTGTGAAATTTTGTAGTAGATAA
Upstream 100 bases:
>100_bases TTGCAAGAGAAATTGTTAGAGGCTGGGGCAGAGTTTGTAGAAGAAATAGATTTAAGTTTAGAAGATATGTTTATATACTC CATGGAAGGAGGAAAAGAGA
Downstream 100 bases:
>100_bases GATTTTATAAGGAAAGTGCGGTGCACTTTCCTTAAATAATAAATATGAATTATAAAGGAGTATATTAAATAGTATTTAAA TTAAATATTATCATGTTGAA
Product: ABC transporter permease
Products: NA
Alternate protein names: Membrane Spanning Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKSLFKDPLFYKEWKSSKWICLLMTLILFWDKPRTASETLSSLKYQMLMDKTFVFDKMWFNQLLLGWSNGKNILVLGVIV LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTISIAFLINFIILTFFYFNNKSQIGSSYLDIPKFYSINLLF SLFFFMFLVFMQSMVGQYFAAAIIAPITLFVPNMFASYIVDLIRLGKGLGYDSPKLMALDQSVRNSNIYDIVNTYAIDRM EKGPDGEQIGHIDRFIYENFDIKIMILIILIVVFAVLAVIIYNRVKLERINKLIIFKPVETVFKLGVGICIGMIFSQIFG YPKGQEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
Sequences:
>Translated_358_residues MKSLFKDPLFYKEWKSSKWICLLMTLILFWDKPRTASETLSSLKYQMLMDKTFVFDKMWFNQLLLGWSNGKNILVLGVIV LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTISIAFLINFIILTFFYFNNKSQIGSSYLDIPKFYSINLLF SLFFFMFLVFMQSMVGQYFAAAIIAPITLFVPNMFASYIVDLIRLGKGLGYDSPKLMALDQSVRNSNIYDIVNTYAIDRM EKGPDGEQIGHIDRFIYENFDIKIMILIILIVVFAVLAVIIYNRVKLERINKLIIFKPVETVFKLGVGICIGMIFSQIFG YPKGQEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR >Mature_358_residues MKSLFKDPLFYKEWKSSKWICLLMTLILFWDKPRTASETLSSLKYQMLMDKTFVFDKMWFNQLLLGWSNGKNILVLGVIV LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTISIAFLINFIILTFFYFNNKSQIGSSYLDIPKFYSINLLF SLFFFMFLVFMQSMVGQYFAAAIIAPITLFVPNMFASYIVDLIRLGKGLGYDSPKLMALDQSVRNSNIYDIVNTYAIDRM EKGPDGEQIGHIDRFIYENFDIKIMILIILIVVFAVLAVIIYNRVKLERINKLIIFKPVETVFKLGVGICIGMIFSQIFG YPKGQEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41211; Mature: 41211
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFKDPLFYKEWKSSKWICLLMTLILFWDKPRTASETLSSLKYQMLMDKTFVFDKMWF CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NQLLLGWSNGKNILVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILT HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH ISIAFLINFIILTFFYFNNKSQIGSSYLDIPKFYSINLLFSLFFFMFLVFMQSMVGQYFA HHHHHHHHHHHHHHHHHCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIIAPITLFVPNMFASYIVDLIRLGKGLGYDSPKLMALDQSVRNSNIYDIVNTYAIDRM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH EKGPDGEQIGHIDRFIYENFDIKIMILIILIVVFAVLAVIIYNRVKLERINKLIIFKPVE CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH TVFKLGVGICIGMIFSQIFGYPKGQEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSLFKDPLFYKEWKSSKWICLLMTLILFWDKPRTASETLSSLKYQMLMDKTFVFDKMWF CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NQLLLGWSNGKNILVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILT HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH ISIAFLINFIILTFFYFNNKSQIGSSYLDIPKFYSINLLFSLFFFMFLVFMQSMVGQYFA HHHHHHHHHHHHHHHHHCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIIAPITLFVPNMFASYIVDLIRLGKGLGYDSPKLMALDQSVRNSNIYDIVNTYAIDRM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH EKGPDGEQIGHIDRFIYENFDIKIMILIILIVVFAVLAVIIYNRVKLERINKLIIFKPVE CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH TVFKLGVGICIGMIFSQIFGYPKGQEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA