Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is dipZ [H]
Identifier: 148380724
GI number: 148380724
Start: 2921679
End: 2923082
Strand: Reverse
Name: dipZ [H]
Synonym: CBO2765
Alternate gene names: 148380724
Gene position: 2923082-2921679 (Counterclockwise)
Preceding gene: 148380725
Following gene: 148380722
Centisome position: 75.2
GC content: 28.13
Gene sequence:
>1404_bases ATGAGTAATTTGTATGAAAAGTATAAAAATGCTAGAGTTCATGCCCCTAATTTCCCAATGACTATTGAGTGGCTAGGTGC CAAGAGGACAAATTTGGATAAACTAAAAGATAGAGTTATACTTTTAGATTTTTGGACTTTTTGCTGTATAAATTGCATAC ATGTAATAGAGGATCTAAAATATTTAGAAGAAAAATATAAGAATAAGTTACAGGTCATAGGAGTACATTCTCCTAAATTT AAATACGAAAAGAACAGTAAAGCTATACTAAATGCTATGAAAAAATACGGAATAAATCATCCAGTAGTAAATGATAAAAA TAAAAGCATATGGGATAGCTATACAGTAAATGCATGGCCAACATTTATATTAATAGATCCAGAGGGATATGCTTTTGCTA TGGTATCAGGAGAAGGTAATAGAGAACTATTGGACCAAATAATAGGTGACACAATGGAGTACTTTGATAATATAAATTGG CCAGATAAAAATATAATTTTAGAAAATAAATGTGAAAAAGAAGAATATATATATCCATCTAAGGCATCTATAAATGAGAA TGGATTAATAGCCTTTTCAGAAAAAGGTAAAAATAGAATAGTAATATTAGACCAAAACTTAGAAAAAATAAAAATAATAG GTAGTGGTGAATATGGATTAAAAGATGGAGATTTTAAAGAGGCCCAATTTAAAGCTCCAGAAGGGTTAAGATTTATAGAA AATAAGATTTATGTTGCAGATACTGAAAACCATTCCATAAGGGAATGCGATTTAGAAAAGGAAATAGTTAAAACTATAGC AGGTAATGGACAAAAGGAATATAGTCCTATGGCAAAGGGAGACGCTTTAAATGTAAGTTTAAATTCTCCTTGGGATCTAG AAATATTAAAAGACTGTATATATATAGCTATGGCAGGAAATCATCAAATATGGAAATATAATATGAGAGATAAAAGTATA GAAAGTCATATAGGTACAGGAGGAGAAAACATAAGAGATGGAAGTTTTGATAAATGCTTATTAGCACAGACTTCAGCTTT ATGTTATGATGGGAAGAAAAAACTATACTTTGTAGATTCAGAAACAAGTTCTATAAGATATGCAGATTTAGAGGAACATA AAGTTCATACACTTATAGGAAAGGGATTGTTTTATTTTGGAAATAAGGTTGGAAGTTTTGAAAATACAATGCTTCAACAT CCTTTAGATTTAAAATATAAAAACAATACATTATATATAGCAGACACTTATAACAATAGAATAGTAAAAGCAGATATTTT AAATAAAAAAGTAGAAATAATAAAAAGAGGATTAAATGAGCCAAATGGAATAGCGATATATGATGATAATATATATATAT GCAATACAAACCATGGCAAAATTGAAAAAATAAGCATAAAATAA
Upstream 100 bases:
>100_bases AAAGAATGTGAAAATAAATATATATATAATAATATACTATATAATAAGAATGAGGAAATTTGAGAGGAGGGAATAAGGAT AGGATTATCCTTATAAATAT
Downstream 100 bases:
>100_bases TAGGTTGTCCCAAAATAAAAATAGATTTAATTTTAATATAATAAATATAAAAAAATACATGCAATAAGCATATGAATAAG ATTTAGTGGTTCTTAATTTG
Product: NHL repeat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKDRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKF KYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFAMVSGEGNRELLDQIIGDTMEYFDNINW PDKNIILENKCEKEEYIYPSKASINENGLIAFSEKGKNRIVILDQNLEKIKIIGSGEYGLKDGDFKEAQFKAPEGLRFIE NKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMRDKSI ESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQH PLDLKYKNNTLYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYDDNIYICNTNHGKIEKISIK
Sequences:
>Translated_467_residues MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKDRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKF KYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFAMVSGEGNRELLDQIIGDTMEYFDNINW PDKNIILENKCEKEEYIYPSKASINENGLIAFSEKGKNRIVILDQNLEKIKIIGSGEYGLKDGDFKEAQFKAPEGLRFIE NKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMRDKSI ESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQH PLDLKYKNNTLYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYDDNIYICNTNHGKIEKISIK >Mature_466_residues SNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKDRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKFK YEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFAMVSGEGNRELLDQIIGDTMEYFDNINWP DKNIILENKCEKEEYIYPSKASINENGLIAFSEKGKNRIVILDQNLEKIKIIGSGEYGLKDGDFKEAQFKAPEGLRFIEN KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMRDKSIE SHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHP LDLKYKNNTLYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYDDNIYICNTNHGKIEKISIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=516, Percent_Identity=32.1705426356589, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI116007528, Length=506, Percent_Identity=33.201581027668, Blast_Score=268, Evalue=5e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 53647; Mature: 53516
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKDRVILLDFWTFCCINCIHVIEDLK CCHHHHHHHCCEEECCCCCEEEEECCCCCCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHH YLEEKYKNKLQVIGVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWP HHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCE TFILIDPEGYAFAMVSGEGNRELLDQIIGDTMEYFDNINWPDKNIILENKCEKEEYIYPS EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEECCC KASINENGLIAFSEKGKNRIVILDQNLEKIKIIGSGEYGLKDGDFKEAQFKAPEGLRFIE CCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC NKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCI CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCHHHHHCEE YIAMAGNHQIWKYNMRDKSIESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDS EEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEEEC ETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDLKYKNNTLYIADTYNNR CCCCEEEECCCHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCEEECCCEEEEEECCCCE IVKADILNKKVEIIKRGLNEPNGIAIYDDNIYICNTNHGKIEKISIK EEEHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCEEEEEEEC >Mature Secondary Structure SNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKDRVILLDFWTFCCINCIHVIEDLK CHHHHHHHCCEEECCCCCEEEEECCCCCCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHH YLEEKYKNKLQVIGVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWP HHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCE TFILIDPEGYAFAMVSGEGNRELLDQIIGDTMEYFDNINWPDKNIILENKCEKEEYIYPS EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEECCC KASINENGLIAFSEKGKNRIVILDQNLEKIKIIGSGEYGLKDGDFKEAQFKAPEGLRFIE CCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC NKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCI CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCHHHHHCEE YIAMAGNHQIWKYNMRDKSIESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDS EEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEEEC ETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDLKYKNNTLYIADTYNNR CCCCEEEECCCHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCEEECCCEEEEEECCCCE IVKADILNKKVEIIKRGLNEPNGIAIYDDNIYICNTNHGKIEKISIK EEEHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]