Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is cheB [H]
Identifier: 148380704
GI number: 148380704
Start: 2896253
End: 2896612
Strand: Reverse
Name: cheB [H]
Synonym: CBO2746
Alternate gene names: 148380704
Gene position: 2896612-2896253 (Counterclockwise)
Preceding gene: 148380705
Following gene: 148380703
Centisome position: 74.52
GC content: 33.06
Gene sequence:
>360_bases ATGGCAAAAGTATTAATCGTTGATGACGCTGCATTTATGAGAATGATGATAAAAGATATATTAGAAAAGAATGGATTTGA AGTTGTAGGAGAAGCTAATAATGGATTAAAAGCTGTAGAACTATATAAAAAAGAGCAACCAGATGTAGTAACTATGGATA TAACTATGCCAGATATGGATGGGATAGAAGCGGTAAAGGCTATAAGAGAATTTGATGCTGCTGCGAAAATAATAATGTGT AGTGCTATGGGACAACAAACTATGGTTATGGATGCTATAAAGGCAGGAGCAAAAGATTTTATTGTAAAACCATTCCAAGC AGATAGAGTTTTAGAAGCTATCAAAAAGGTTATAGGATAA
Upstream 100 bases:
>100_bases AAGTGGGCATTTTTATTACATACCAATGCCTGGTTCATTAGAAAAAATATTAAATACATTAGGAGTAAGTTAATTTGTAT TAATTTGGAGGGAAAGAAAA
Downstream 100 bases:
>100_bases AGTATAAAAGAAATTTAATTTCTTAAAGTTTAAAACTTATAGGTGCATTAGGCAAGTTTCTTAATGCACTGATAGTTTAT TTTGAGAGGAGGCTTTCCTT
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAKVLIVDDAAFMRMMIKDILEKNGFEVVGEANNGLKAVELYKKEQPDVVTMDITMPDMDGIEAVKAIREFDAAAKIIMC SAMGQQTMVMDAIKAGAKDFIVKPFQADRVLEAIKKVIG
Sequences:
>Translated_119_residues MAKVLIVDDAAFMRMMIKDILEKNGFEVVGEANNGLKAVELYKKEQPDVVTMDITMPDMDGIEAVKAIREFDAAAKIIMC SAMGQQTMVMDAIKAGAKDFIVKPFQADRVLEAIKKVIG >Mature_118_residues AKVLIVDDAAFMRMMIKDILEKNGFEVVGEANNGLKAVELYKKEQPDVVTMDITMPDMDGIEAVKAIREFDAAAKIIMCS AMGQQTMVMDAIKAGAKDFIVKPFQADRVLEAIKKVIG
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=38.8888888888889, Blast_Score=83, Evalue=5e-18, Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=34.7457627118644, Blast_Score=73, Evalue=6e-15, Organism=Escherichia coli, GI1788222, Length=118, Percent_Identity=37.2881355932203, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1788521, Length=114, Percent_Identity=34.2105263157895, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1786911, Length=105, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=31.3559322033898, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1788192, Length=104, Percent_Identity=35.5769230769231, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=28.448275862069, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1787473, Length=116, Percent_Identity=30.1724137931034, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=29.3103448275862, Blast_Score=60, Evalue=4e-11, Organism=Escherichia coli, GI1787375, Length=110, Percent_Identity=29.0909090909091, Blast_Score=60, Evalue=5e-11, Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=28.695652173913, Blast_Score=59, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13084; Mature: 12953
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 9.2 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVLIVDDAAFMRMMIKDILEKNGFEVVGEANNGLKAVELYKKEQPDVVTMDITMPDMD CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCC GIEAVKAIREFDAAAKIIMCSAMGQQTMVMDAIKAGAKDFIVKPFQADRVLEAIKKVIG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHC >Mature Secondary Structure AKVLIVDDAAFMRMMIKDILEKNGFEVVGEANNGLKAVELYKKEQPDVVTMDITMPDMD CEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCC GIEAVKAIREFDAAAKIIMCSAMGQQTMVMDAIKAGAKDFIVKPFQADRVLEAIKKVIG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]