| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380665
Identifier: 148380665
GI number: 148380665
Start: 2854834
End: 2856255
Strand: Reverse
Name: 148380665
Synonym: CBO2707
Alternate gene names: NA
Gene position: 2856255-2854834 (Counterclockwise)
Preceding gene: 148380666
Following gene: 148380664
Centisome position: 73.48
GC content: 24.4
Gene sequence:
>1422_bases ATGTATAAAACCATAATATTTGGATGTGGAAGCTTCGGAGAAAGAGTATACAATAATTTAAAAGAAGACTATGATATACA ATATTTTTGTGATAATGATAAGAATAAATGGGGAAAAAACTTTTGTGACAAAAAAGTTATATCGCCTAAACAACTTTTAG AGTTAGGAAACGATATTCATGTTATAGTAGCCAGCACTTATTATAAAGAAATTATAGGACAGCTTTTAGAGATGAAAATA AAAAATATAGAATATTACACTGAAGCTAATAGTTTTTTAAATAAAATTAATTACGAGGATTTTAAGTTTGATAGTTATAG TTATTTAGATAATAATTATTTTTCATGCAGTAAAAATTTAATAAAAAAAGTTTTGTTTGTACAAGATGCTCAATGCATAA GAACTTATAAAATTTCAAAAGTATTACAAGAGATGGGTATACAAGTAGATATCGCATATTTAAAAAGTCATCCTTCTATA GCATATAAGGGTTTAAAACTTGCTTATACAAACATAATTAGAATAAAAGATATGAATAGTTTTCTTAATTTTGTAAATGA ATCAGACTATGATATAATACATAGTTCAAATGAACCAGATTATTTAACATGTTTACTTACTAAATCTAATAAACCTATAG TTCATGATTGTCATGATTTAATGAGTCTAAGGGGAGATATATCGAATGATGAATTAGTACATGAATTTGTTGCTAATAAA TTTAGTCATGGGAATATGTATGTGGATTATTCCGTTAAAAACTATGCAATGAAAAAATTTGATTTAGATGAAAGCAAGCC TATATTGGTGCTTAATAATTATACCTTAAGGGAACAGAAACCTAAAAATTTTTTAAAAAAGTTAAGTGAAATTGATGGAG AAATACATTGTGTTTATCAAGGAGGGATGTCTAGTGATTCTAGTAATCATAGATGCATAGAAGATAAATTATTGAAATTG GCTAAACATAAAATACATGTACATTTTTATACTCTTAATTATAGTGAATATTACGAGAAAATTGCATTAAAAAGTAATTA TATTCATTGGGAAGGAACTAGAGAACCATATGAATTGATTCAAGAAATGACACAATATGATGTTGGGTTAGTAATTTTCA ATGTGAATTTTAGAAATAAGTATTTTTTATCTTCAGCATTTCCAAATAAAATGATTGAGTATCTAAATTCTGGATTACCG CTTCTAGTAGAAGATTTACCAACATTAAAAAAATTTGTGAAGGAAACAGGATGTGGAGATATTATAGATTTTAGTTTAGA TATTAATAGACAAATAGAAAATATTAAAAATCTACATATAAGTGATGATTTTTTAGAAAATAATCAGTTTATTATGGAAA AGCAAACTAATAATATCATAAATTTTTATAATAAAGTTATAAATTCAATTAATAACAGATAG
Upstream 100 bases:
>100_bases TTCCCGAGGACTAAGTGGCAAAGAAATATTAGCTATATTTAATTCAAACCATTAGGTCTTTATATAAGTTTTAAAATATT TGATTAAGAGGAGGGAATAT
Downstream 100 bases:
>100_bases AAAATCATTTGAGTTTAGTAGTTAAGGAGCAAAAGCATGTCTATTTTAGTTGTAGAAAAAAATAATGATAGATTAAATGG TTTAACTGAAGGGAAAAAAT
Product: capsular polysaccharide synthesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MYKTIIFGCGSFGERVYNNLKEDYDIQYFCDNDKNKWGKNFCDKKVISPKQLLELGNDIHVIVASTYYKEIIGQLLEMKI KNIEYYTEANSFLNKINYEDFKFDSYSYLDNNYFSCSKNLIKKVLFVQDAQCIRTYKISKVLQEMGIQVDIAYLKSHPSI AYKGLKLAYTNIIRIKDMNSFLNFVNESDYDIIHSSNEPDYLTCLLTKSNKPIVHDCHDLMSLRGDISNDELVHEFVANK FSHGNMYVDYSVKNYAMKKFDLDESKPILVLNNYTLREQKPKNFLKKLSEIDGEIHCVYQGGMSSDSSNHRCIEDKLLKL AKHKIHVHFYTLNYSEYYEKIALKSNYIHWEGTREPYELIQEMTQYDVGLVIFNVNFRNKYFLSSAFPNKMIEYLNSGLP LLVEDLPTLKKFVKETGCGDIIDFSLDINRQIENIKNLHISDDFLENNQFIMEKQTNNIINFYNKVINSINNR
Sequences:
>Translated_473_residues MYKTIIFGCGSFGERVYNNLKEDYDIQYFCDNDKNKWGKNFCDKKVISPKQLLELGNDIHVIVASTYYKEIIGQLLEMKI KNIEYYTEANSFLNKINYEDFKFDSYSYLDNNYFSCSKNLIKKVLFVQDAQCIRTYKISKVLQEMGIQVDIAYLKSHPSI AYKGLKLAYTNIIRIKDMNSFLNFVNESDYDIIHSSNEPDYLTCLLTKSNKPIVHDCHDLMSLRGDISNDELVHEFVANK FSHGNMYVDYSVKNYAMKKFDLDESKPILVLNNYTLREQKPKNFLKKLSEIDGEIHCVYQGGMSSDSSNHRCIEDKLLKL AKHKIHVHFYTLNYSEYYEKIALKSNYIHWEGTREPYELIQEMTQYDVGLVIFNVNFRNKYFLSSAFPNKMIEYLNSGLP LLVEDLPTLKKFVKETGCGDIIDFSLDINRQIENIKNLHISDDFLENNQFIMEKQTNNIINFYNKVINSINNR >Mature_473_residues MYKTIIFGCGSFGERVYNNLKEDYDIQYFCDNDKNKWGKNFCDKKVISPKQLLELGNDIHVIVASTYYKEIIGQLLEMKI KNIEYYTEANSFLNKINYEDFKFDSYSYLDNNYFSCSKNLIKKVLFVQDAQCIRTYKISKVLQEMGIQVDIAYLKSHPSI AYKGLKLAYTNIIRIKDMNSFLNFVNESDYDIIHSSNEPDYLTCLLTKSNKPIVHDCHDLMSLRGDISNDELVHEFVANK FSHGNMYVDYSVKNYAMKKFDLDESKPILVLNNYTLREQKPKNFLKKLSEIDGEIHCVYQGGMSSDSSNHRCIEDKLLKL AKHKIHVHFYTLNYSEYYEKIALKSNYIHWEGTREPYELIQEMTQYDVGLVIFNVNFRNKYFLSSAFPNKMIEYLNSGLP LLVEDLPTLKKFVKETGCGDIIDFSLDINRQIENIKNLHISDDFLENNQFIMEKQTNNIINFYNKVINSINNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55542; Mature: 55542
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKTIIFGCGSFGERVYNNLKEDYDIQYFCDNDKNKWGKNFCDKKVISPKQLLELGNDIH CCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCEE VIVASTYYKEIIGQLLEMKIKNIEYYTEANSFLNKINYEDFKFDSYSYLDNNYFSCSKNL EEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHH IKKVLFVQDAQCIRTYKISKVLQEMGIQVDIAYLKSHPSIAYKGLKLAYTNIIRIKDMNS HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHCCEEEEEEEEEEEECHHH FLNFVNESDYDIIHSSNEPDYLTCLLTKSNKPIVHDCHDLMSLRGDISNDELVHEFVANK HHHHHCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC FSHGNMYVDYSVKNYAMKKFDLDESKPILVLNNYTLREQKPKNFLKKLSEIDGEIHCVYQ CCCCCEEEEEEHHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEE GGMSSDSSNHRCIEDKLLKLAKHKIHVHFYTLNYSEYYEKIALKSNYIHWEGTREPYELI CCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHCCCEEEECCCCCHHHHH QEMTQYDVGLVIFNVNFRNKYFLSSAFPNKMIEYLNSGLPLLVEDLPTLKKFVKETGCGD HHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCC IIDFSLDINRQIENIKNLHISDDFLENNQFIMEKQTNNIINFYNKVINSINNR EEEEEEECHHHHHHHHCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MYKTIIFGCGSFGERVYNNLKEDYDIQYFCDNDKNKWGKNFCDKKVISPKQLLELGNDIH CCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCEE VIVASTYYKEIIGQLLEMKIKNIEYYTEANSFLNKINYEDFKFDSYSYLDNNYFSCSKNL EEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHH IKKVLFVQDAQCIRTYKISKVLQEMGIQVDIAYLKSHPSIAYKGLKLAYTNIIRIKDMNS HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHCCEEEEEEEEEEEECHHH FLNFVNESDYDIIHSSNEPDYLTCLLTKSNKPIVHDCHDLMSLRGDISNDELVHEFVANK HHHHHCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC FSHGNMYVDYSVKNYAMKKFDLDESKPILVLNNYTLREQKPKNFLKKLSEIDGEIHCVYQ CCCCCEEEEEEHHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEE GGMSSDSSNHRCIEDKLLKLAKHKIHVHFYTLNYSEYYEKIALKSNYIHWEGTREPYELI CCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHCCCEEEECCCCCHHHHH QEMTQYDVGLVIFNVNFRNKYFLSSAFPNKMIEYLNSGLPLLVEDLPTLKKFVKETGCGD HHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCC IIDFSLDINRQIENIKNLHISDDFLENNQFIMEKQTNNIINFYNKVINSINNR EEEEEEECHHHHHHHHCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA