| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148380662
Identifier: 148380662
GI number: 148380662
Start: 2851019
End: 2851546
Strand: Reverse
Name: 148380662
Synonym: CBO2704
Alternate gene names: NA
Gene position: 2851546-2851019 (Counterclockwise)
Preceding gene: 148380663
Following gene: 148380661
Centisome position: 73.36
GC content: 21.97
Gene sequence:
>528_bases ATGGGAAAAAATATTTTTTTTATAAGGTCTGCGAATGGACAAGTCATAGAACAACTTGTAGATTATATTAAAAATAAGCA TAAAAATGAAAATATTAAATTGTATTGTTTAATACAAAAGAGTTCTGTGAAAAGTTTTAATGAAAAATATCCTAGTATAA AATGTATTGAAAGTGAAGATGGATTTTTTAAATATTCAGTGCTTAAAAATAATAAAGAACTTCTACATAAACTTAATGAT TTCCAGTTTGATGAATTATATATACCATCTTCCTATGGAGATTACCCAGACTTTAACGAAGTTTTTTTAATATGTTCAAA AATAAAAAATGATAAAACTATTCTTTATAATTGTTATGGGGAAACAGTAGAGAAAAAATTAAATTTTGCTTATATATGGA TTGATAAAAATTTAGGAGAAGCAATATATTTTTTCAAAGTACTATTTGCACTGATTGGAATAAGTTTAATATATTTAGTA TGTTATCCGTATTATTTTGTTAAAAGAAAATTATTTGATAATATTTAG
Upstream 100 bases:
>100_bases AATGCAAGGCAGTCTATAAAATATATTTATAACTGGTCAATTATGGAGAAAAAATTGCTGAGCATATATAACAATATTTT AGATAAAAGGTGATTTATAA
Downstream 100 bases:
>100_bases CATCTATTTAGTAGATGCTTTTGTTTTTTAAAGATTTAAGTTAAATTCACGATAAAATTATAGTAACTAGGTTTTATATT TAAACATTAATAGGAGGATA
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGKNIFFIRSANGQVIEQLVDYIKNKHKNENIKLYCLIQKSSVKSFNEKYPSIKCIESEDGFFKYSVLKNNKELLHKLND FQFDELYIPSSYGDYPDFNEVFLICSKIKNDKTILYNCYGETVEKKLNFAYIWIDKNLGEAIYFFKVLFALIGISLIYLV CYPYYFVKRKLFDNI
Sequences:
>Translated_175_residues MGKNIFFIRSANGQVIEQLVDYIKNKHKNENIKLYCLIQKSSVKSFNEKYPSIKCIESEDGFFKYSVLKNNKELLHKLND FQFDELYIPSSYGDYPDFNEVFLICSKIKNDKTILYNCYGETVEKKLNFAYIWIDKNLGEAIYFFKVLFALIGISLIYLV CYPYYFVKRKLFDNI >Mature_174_residues GKNIFFIRSANGQVIEQLVDYIKNKHKNENIKLYCLIQKSSVKSFNEKYPSIKCIESEDGFFKYSVLKNNKELLHKLNDF QFDELYIPSSYGDYPDFNEVFLICSKIKNDKTILYNCYGETVEKKLNFAYIWIDKNLGEAIYFFKVLFALIGISLIYLVC YPYYFVKRKLFDNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20791; Mature: 20660
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNIFFIRSANGQVIEQLVDYIKNKHKNENIKLYCLIQKSSVKSFNEKYPSIKCIESED CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCEEEEECCC GFFKYSVLKNNKELLHKLNDFQFDELYIPSSYGDYPDFNEVFLICSKIKNDKTILYNCYG CEEEEEEECCCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC ETVEKKLNFAYIWIDKNLGEAIYFFKVLFALIGISLIYLVCYPYYFVKRKLFDNI HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKNIFFIRSANGQVIEQLVDYIKNKHKNENIKLYCLIQKSSVKSFNEKYPSIKCIESED CCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCEEEEECCC GFFKYSVLKNNKELLHKLNDFQFDELYIPSSYGDYPDFNEVFLICSKIKNDKTILYNCYG CEEEEEEECCCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC ETVEKKLNFAYIWIDKNLGEAIYFFKVLFALIGISLIYLVCYPYYFVKRKLFDNI HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA