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The map label for this gene is yfmS [H]

Identifier: 148380652

GI number: 148380652

Start: 2840610

End: 2841458

Strand: Reverse

Name: yfmS [H]

Synonym: CBO2694

Alternate gene names: 148380652

Gene position: 2841458-2840610 (Counterclockwise)

Preceding gene: 148380653

Following gene: 148380651

Centisome position: 73.1

GC content: 31.21

Gene sequence:

>849_bases
ATGGGTGAAAATAGGAGATTTCAAAGTAATGAAGAAATATTAGCAGCTTTTAAACTAGTACTACCTTACATAAATAAAAT
CATTCATGAAGATATGGTGGTAGGTCTTACGGATTTAGAAAAATATGCTGGTTATCATAGAGCTAAAGAATTTGAACTAG
ATTTACCAGAAGGAAAACCTATAAAAGGTATAAAAACCATAGAGGAATGTATTAAATATAAAAAAGAAACCTATGATAAT
ATTCCAAAGGAAGTGTATGGTAGAGCTATAAAAACAATATTCACTCCTATTTATGGCGTAAACAATGAAGTTATAGGTAC
CCTTAGTTCAGGAATAGATTTTGGTAATAATAATCAATTAGTGGAAAATGTTCAAAAATTAGTCGAAAATGTTAAACAGG
TAACCGAAAATACTGCTCAAGTATCAGAGGCAGCGGAAAGTTTGGCAAAGTCAGGTCAAAATGCTATTTCTATGGTAGAA
GAATTAAATAATAAGAAAAATGATACTTCCGAAATTCTGGAATTTATAAAGGGTATTGCCACTCAAACTAATTTATTAGG
ACTTAATGCAGCTATAGAAGCTGCAAGAGCAGGGGAATCTGGCCGTGGATTTGCAGTAGTTGCAGGACAGGTTAGAAAAT
TGTCAGATCAATCTCAAGAGGCTGTTAAGAACATCGAAAAAATATTAGATGAAATGAATAATAGTGTAAATGAAATTAAT
AATACCATAGGAAGTGTAGGAGCTATTAGTGAAGAGCAAGCAGCTTCCACAGAGGAGATTTTATCTAGAATAGAAACACT
TAATGAAACTATTAAAAACTTACAAGAATTTGTAGAGAAATATAAATAA

Upstream 100 bases:

>100_bases
ATAATAAGTAAATCGCTTCTATAGATGATGAAAATATATACAAAACACAAAAATCCTATTAGTTAAAAAACAAACCTAAA
CAAAAAAGGGGAGAATATAA

Downstream 100 bases:

>100_bases
AAGTTTATAACAAAGTCCCCACTTAATAATAGTTGGGGACTATTCTAATGTTATGTAGCATAGAGTTTTAGAAAAAGTTT
ATTTTATAAATTTTTTATGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYAGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDN
IPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFGNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVE
ELNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK

Sequences:

>Translated_282_residues
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYAGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDN
IPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFGNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVE
ELNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
>Mature_281_residues
GENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYAGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDNI
PKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFGNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEE
LNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEINN
TIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=254, Percent_Identity=30.3149606299213, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788195, Length=166, Percent_Identity=33.7349397590361, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI2367378, Length=163, Percent_Identity=31.9018404907975, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789453, Length=181, Percent_Identity=34.2541436464088, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=183, Percent_Identity=32.7868852459016, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 31260; Mature: 31128

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYAGYHRAKEFELDLPEGKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IKGIKTIEECIKYKKETYDNIPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFGNNNQL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
VENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEELNNKKNDTSEILEFIKGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYAGYHRAKEFELDLPEGKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IKGIKTIEECIKYKKETYDNIPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFGNNNQL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
VENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEELNNKKNDTSEILEFIKGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]