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The map label for this gene is ywqC [H]

Identifier: 148380647

GI number: 148380647

Start: 2837248

End: 2837925

Strand: Reverse

Name: ywqC [H]

Synonym: CBO2689

Alternate gene names: 148380647

Gene position: 2837925-2837248 (Counterclockwise)

Preceding gene: 148380648

Following gene: 148380646

Centisome position: 73.01

GC content: 26.7

Gene sequence:

>678_bases
ATGAATGAAGAAGTAACCTTAGATTTACAGGAGATTCTTAATGTATTAAAAAAGAAAAAAAAGATGATTTTAATAACAAC
TCTATTATTTGGAATAATATCCGCAGCCTTAAGCTTTTTTATTATTCCACCTATCTATGAAATAAAGGCTAGTGTAGTTA
TAGGTAAGACTTTAGATGAAAAAAATGAAAATAAAAATGATTATAATGATGTTATGATGTATCAAAAGTTAGTTAAAACC
TATGCCAAAATAGCTAGTTCTAGAACTTTAGCAGAAAATGTAGCAGCTAAAACTGGAGAATTAAAACCGGAGGATCTACA
AGAAGAATTAGAAGTAACACCTCAACAAGATACCCAAATTTTAGATTTAAAAATAGAACATAAAGATGCAGCATATGCAC
AAAAAATACTTACCATAGTTTGTGATGAATTTATAGCTGAAAGTAAAAAAATATATCCTAATAACACTATAGAATTATTA
GATAAGCCTGTAATACCAGAAAAGCCTATAAAACCAAGAAAACTATTAAATATAGCTATAGCTTTATTTATGGGACTTTT
ATTGTCTGCAGGTAGGGCTTTTATACAAGAATATATGGATAAAACTATAAAAACAGAAAACGATATAGATAAATATTTAG
AACTTCCAGTAATAGCTGTAATACCTAAAATAAAATAA

Upstream 100 bases:

>100_bases
TTTAACAAGGAAAAAACTATAGATCAAATGTACAAATATATATTTGAAGATATAAAACCTAATTAACTTAGTATACTTAG
ATATGGAGGAAAGTCTTAAG

Downstream 100 bases:

>100_bases
GGAGAGAATAATTATATGATAGATATTCACAGTCATATAATACCATCTGTAGATGATGGGGCAAATGATTTAGATTATTC
TTTAAAGATGCTTAAAATGG

Product: capsular polysaccharide biosynthsis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNEEVTLDLQEILNVLKKKKKMILITTLLFGIISAALSFFIIPPIYEIKASVVIGKTLDEKNENKNDYNDVMMYQKLVKT
YAKIASSRTLAENVAAKTGELKPEDLQEELEVTPQQDTQILDLKIEHKDAAYAQKILTIVCDEFIAESKKIYPNNTIELL
DKPVIPEKPIKPRKLLNIAIALFMGLLLSAGRAFIQEYMDKTIKTENDIDKYLELPVIAVIPKIK

Sequences:

>Translated_225_residues
MNEEVTLDLQEILNVLKKKKKMILITTLLFGIISAALSFFIIPPIYEIKASVVIGKTLDEKNENKNDYNDVMMYQKLVKT
YAKIASSRTLAENVAAKTGELKPEDLQEELEVTPQQDTQILDLKIEHKDAAYAQKILTIVCDEFIAESKKIYPNNTIELL
DKPVIPEKPIKPRKLLNIAIALFMGLLLSAGRAFIQEYMDKTIKTENDIDKYLELPVIAVIPKIK
>Mature_225_residues
MNEEVTLDLQEILNVLKKKKKMILITTLLFGIISAALSFFIIPPIYEIKASVVIGKTLDEKNENKNDYNDVMMYQKLVKT
YAKIASSRTLAENVAAKTGELKPEDLQEELEVTPQQDTQILDLKIEHKDAAYAQKILTIVCDEFIAESKKIYPNNTIELL
DKPVIPEKPIKPRKLLNIAIALFMGLLLSAGRAFIQEYMDKTIKTENDIDKYLELPVIAVIPKIK

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 25550; Mature: 25550

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEVTLDLQEILNVLKKKKKMILITTLLFGIISAALSFFIIPPIYEIKASVVIGKTLDE
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHC
KNENKNDYNDVMMYQKLVKTYAKIASSRTLAENVAAKTGELKPEDLQEELEVTPQQDTQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEE
LDLKIEHKDAAYAQKILTIVCDEFIAESKKIYPNNTIELLDKPVIPEKPIKPRKLLNIAI
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH
ALFMGLLLSAGRAFIQEYMDKTIKTENDIDKYLELPVIAVIPKIK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MNEEVTLDLQEILNVLKKKKKMILITTLLFGIISAALSFFIIPPIYEIKASVVIGKTLDE
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHC
KNENKNDYNDVMMYQKLVKTYAKIASSRTLAENVAAKTGELKPEDLQEELEVTPQQDTQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEE
LDLKIEHKDAAYAQKILTIVCDEFIAESKKIYPNNTIELLDKPVIPEKPIKPRKLLNIAI
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH
ALFMGLLLSAGRAFIQEYMDKTIKTENDIDKYLELPVIAVIPKIK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]