Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is rluD1
Identifier: 148379448
GI number:
Start: 1607509
End: 1608426
Strand: Direct
Name: rluD1
Synonym: CBO1476
Alternate gene names: NA
Gene position: NA
Preceding gene: 148379447
Following gene: 148379449
Centisome position: NA
GC content: NA
Gene sequence:
>918_bases ATGGAAAAAATAAATTTACAAGTAGAAAAAGAATTTGATAATGTAAGATTAGATTTATACTTATCCAAAATATTTGAAGA CAAATCTAGATCTTATCTTCAAGGGATTATAGATGAAGGTAATGTTCTAGTAAATAATAAAGAAAAAAAGAGAAATTATA AATTAAAAGTTGGAGATAATATTGAAGTAAATATACCAGAACCAAAATTGCTTCAAATAGAACCAGAAGATATTAAGCTA GATATAATATATGAAGATAAGGATGTAATAGTTGTGAATAAGCCCCAAGAAATGGTGGTACATCCTGCACCAGGAGTATA TTCAGGAACGTTAGTTAATGCTCTTTTACATCATTGTAAAGATTTATCTGGTATAAATGGGGTAGCAAGACCTGGTATTG TTCATAGAATAGATAAGGATACTTCAGGAATATTAGTTGTGGCAAAGAATGACATATCTCACAATAATTTAGCAGCTCAG TTTAAAGAGCATTCAATTTCTAGAGTATATATGGCATTGGTAGAGGGCATAATAAAGGATGAACAGGGAACCATAGAGGC GCCTATAGGTAGACACCCTGTAGATAGAATAAAAATGGCGGTAGTAAAAGATGGAAGGCATGCCGTAACTCACTACAAGG TCATAGAGAGATTTAAAAATCATACTTTAGTAGAGTGTAGGTTAGAAACAGGAAGAACACATCAAATAAGAGTTCATATG AGCCACATAATGCATCCTTTAGTAGGAGATCCTGTTTATGGTTATAAAAAACAAAGATTTAATCTAAAGGGACAAATGTT GCATGCAAAGTTATTAGGCTTTATTCATCCTACTACGAGACAATATGTAGAATTTGAAAGTGAACTACCAGAATATTTCA AGAAAATAATAAAAATCTTAAAAAATGAATTGATTTAA
Upstream 100 bases:
>100_bases TAAAGATGTTTATTATTTCCCTACATTTAATGTAGCGGATATGTTAGTAGTTATAGGTACTGTACTACTAGCTATATACA TATTAAAGGAAGAGTAGTTT
Downstream 100 bases:
>100_bases TTGCAAAATAGTGATAATATATGTCTATAAATGTCACAAAAGATAAAAACATAAAATAACAGAAGATAAAATTTTCTAAG AACAAAAGATAAAATAGTTT
Product: pseudouridine synthase, RluA family
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>305_residues MEKINLQVEKEFDNVRLDLYLSKIFEDKSRSYLQGIIDEGNVLVNNKEKKRNYKLKVGDNIEVNIPEPKLLQIEPEDIKL DIIYEDKDVIVVNKPQEMVVHPAPGVYSGTLVNALLHHCKDLSGINGVARPGIVHRIDKDTSGILVVAKNDISHNNLAAQ FKEHSISRVYMALVEGIIKDEQGTIEAPIGRHPVDRIKMAVVKDGRHAVTHYKVIERFKNHTLVECRLETGRTHQIRVHM SHIMHPLVGDPVYGYKKQRFNLKGQMLHAKLLGFIHPTTRQYVEFESELPEYFKKIIKILKNELI
Sequences:
NA
Specific function: NA
COG id: COG0564
COG function: function code J; Pseudouridylate synthases, 23S RNA-specific
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA