| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yjqA [H]
Identifier: 148379353
GI number: 148379353
Start: 1502167
End: 1502544
Strand: Direct
Name: yjqA [H]
Synonym: CBO1378
Alternate gene names: 148379353
Gene position: 1502167-1502544 (Clockwise)
Preceding gene: 148379352
Following gene: 148379354
Centisome position: 38.65
GC content: 27.78
Gene sequence:
>378_bases ATGGGATTATTTAATGGATTAATGGGAAACGCTTCAGAGGTTAATATAATGGAAGTAGAGAAAGAATATAGTAATGTATT AGCTGAAAATGAAAGAGTAGAAAAAGCTTATAAGTTAATTCGTGATATGTTTATTTTTACAAACAAAAGATTAATTCTAG TAGATAAGCAGGGTATGACAGCTAGGAAAACAGAATATCATTCTATTCCATACAAAGCTATAACACATTTTAGTATAGAA ACAGCGGGCAATTTTGATTTAGATGCAGAACTTAAAATATGGATTTCAGGAACTCAACTGCCTATAGAAAAGCAATTTAA TAAAAGTTTAAATATATATGAGCTTCAAAGTGTATTAGCTAACTATGTTTTAAAATAA
Upstream 100 bases:
>100_bases AAAGCAGATTATAAAAAGTTATGGAACTTAGAATTTTAAAGGATTCTAGAATTTTAAAAATAAGTTTATAAAAATTAAGT TAATTGTAGGAGGATGAAAG
Downstream 100 bases:
>100_bases GGATTAAAAAATATGGAGAGAAAAAAATTACTAATTATATTTAGATACATAGCTATATTATTTCTTATATTTGGTATAGC TTCTTTTGAAAAAGAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIE TAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK
Sequences:
>Translated_125_residues MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIE TAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK >Mature_124_residues GLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIET AGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012544 [H]
Pfam domain/function: PF08000 DUF1696 [H]
EC number: NA
Molecular weight: Translated: 14426; Mature: 14295
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMT CCCCCCCCCCCCCEEHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC ARKTEYHSIPYKAITHFSIETAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLA CCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHH NYVLK HHHCC >Mature Secondary Structure GLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMT CCCCCCCCCCCCEEHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC ARKTEYHSIPYKAITHFSIETAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLA CCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHH NYVLK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]