| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379326
Identifier: 148379326
GI number: 148379326
Start: 1472691
End: 1473332
Strand: Direct
Name: 148379326
Synonym: CBO1348
Alternate gene names: NA
Gene position: 1472691-1473332 (Clockwise)
Preceding gene: 148379325
Following gene: 148379327
Centisome position: 37.89
GC content: 28.97
Gene sequence:
>642_bases ATGGATAAAAATGTTGCATGGTATATTAAAAAACAGGTTGAAAGAACTATAAAGAATCTAAATAGCCGAAATATGGGAGG ATATTATATTAATAATATAAATCAATTATTCCAAAAATTAAAGGAGCTTATGCCGGAAGGGTCAACAATCGGTGTAGGAG ATTCAATGACTCTTTTTGAAACTGGAGTAATAGATTTTTTAAGAAGTGAAAACTTTAATTTTTTAGATAAATATCAAGAT AGACTTACAAGTGATGAAAAAAGAGATATATACATTAAGAATTTTTCTGCAGATACTTTTATTTGTAGTACTAATGCAAT AACTGAAAGTGGAGAACTGTACAATATAGATGGAAATGGGAGTAGAGTTGCACCAATGATATATGGACCCAAACAGGTTA TTCTTATAGTTGGAATAAATAAAATTGTTAAGAATATAGAAGAGGCTGAAATTAGAGTAAGAAGCTATGCTGCTCCTATT GATGCAAAAAGATTAAATAAAGATACCCCATGTACACAATTGGGTTATTGTGTTGATTGTAAAAGCCCAAATAGAATCTG TAATGATTTTGTTGTAATTAGGGGACAGTTTATTAAAGGGAGAATAAAAGTATTAATCCTTGGAGAAAATTTAGGTTATT AA
Upstream 100 bases:
>100_bases TTGCAATGTTTTAAAATAAAGTTAATTAAATTTATATTATAGAGATATATGCAAGATTGGCTTATTTATCTGGAACTTTA ATTTTAGGAGTGATAGGAAT
Downstream 100 bases:
>100_bases ATTATATACTTATAAATTAAAAGTATATAGTAATATAAAGTAACCATATTTAAATATGCTATAAGAGAATTAGGTTGTAA ATAATGTGGAGTTTGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMPEGSTIGVGDSMTLFETGVIDFLRSENFNFLDKYQD RLTSDEKRDIYIKNFSADTFICSTNAITESGELYNIDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI DAKRLNKDTPCTQLGYCVDCKSPNRICNDFVVIRGQFIKGRIKVLILGENLGY
Sequences:
>Translated_213_residues MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMPEGSTIGVGDSMTLFETGVIDFLRSENFNFLDKYQD RLTSDEKRDIYIKNFSADTFICSTNAITESGELYNIDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI DAKRLNKDTPCTQLGYCVDCKSPNRICNDFVVIRGQFIKGRIKVLILGENLGY >Mature_213_residues MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMPEGSTIGVGDSMTLFETGVIDFLRSENFNFLDKYQD RLTSDEKRDIYIKNFSADTFICSTNAITESGELYNIDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI DAKRLNKDTPCTQLGYCVDCKSPNRICNDFVVIRGQFIKGRIKVLILGENLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24231; Mature: 24231
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMPEGSTIGVGDSMTLFE CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCCCCCHHHH TGVIDFLRSENFNFLDKYQDRLTSDEKRDIYIKNFSADTFICSTNAITESGELYNIDGNG HHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC SRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPIDAKRLNKDTPCTQLGYCVDC CEEEEEEECCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEC KSPNRICNDFVVIRGQFIKGRIKVLILGENLGY CCCCHHHCCEEEEEEEEEECEEEEEEEECCCCC >Mature Secondary Structure MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMPEGSTIGVGDSMTLFE CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEECCCCCCHHHH TGVIDFLRSENFNFLDKYQDRLTSDEKRDIYIKNFSADTFICSTNAITESGELYNIDGNG HHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC SRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPIDAKRLNKDTPCTQLGYCVDC CEEEEEEECCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEC KSPNRICNDFVVIRGQFIKGRIKVLILGENLGY CCCCHHHCCEEEEEEEEEECEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA