Click here to switch to the map view.

The map label for this gene is 148379293

Identifier: 148379293

GI number: 148379293

Start: 1431216

End: 1431644

Strand: Direct

Name: 148379293

Synonym: CBO1314

Alternate gene names: NA

Gene position: 1431216-1431644 (Clockwise)

Preceding gene: 148379292

Following gene: 148379295

Centisome position: 36.82

GC content: 28.21

Gene sequence:

>429_bases
ATGAAAAACACTATGGAAAACTGTAATTTTTGCAAGATAATAAACAAGGAAAAAAAGGCTAATATTGTATACCAAAATGA
TTTGGTTTGCTGTTTTTTAGCAGAAGAGCCTATTAATGAAGGACATATGCTAATAGCACCTAAAAAACACTATTTAGATT
TAGACCAAATGGATGATGAAACGGCTATAGAAATAATGAAAGTATCTAAAATTATGGTAAAGGTACTGAAAGATACATAT
AAATCAGATGGATATAGTATAATGCAAAATGGTGGAAGCTTTAATAATGTTGGTCATTATCATATGCATTTATTTCCAAG
ATATAAAGGAGATAGTTTCAGTTGGAGTTATGGAGAAGAGGATAGTAGCACCCTTGAAGTTGTAAGTAAAAAAATACAAC
AACAATTAAAAGATTATGTAATAAAATAA

Upstream 100 bases:

>100_bases
TATAGTATATTTAATAGTATGTTTTATTTTTTCAAAGTTAGTTACAATAAAAAAGGTAAGTAGAATTTTATTTTAAATTT
TTATAAAAAAGGAGATAAGT

Downstream 100 bases:

>100_bases
TTTATATTTAAAGTAAAGTTATTTTAATATGTTTTCTAATTAGATTACTAAAAAATTAATTATAAGAAAATTTTATTTAA
TTGTAATAGTATATTTTAAA

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMKVSKIMVKVLKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDSSTLEVVSKKIQQQLKDYVIK

Sequences:

>Translated_142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMKVSKIMVKVLKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDSSTLEVVSKKIQQQLKDYVIK
>Mature_142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMKVSKIMVKVLKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDSSTLEVVSKKIQQQLKDYVIK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=135, Percent_Identity=31.8518518518519, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 16486; Mature: 16486

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDE
CCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCEEEEECHHHCCCCCCCCCH
TAIEIMKVSKIMVKVLKDTYKSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DSSTLEVVSKKIQQQLKDYVIK
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDE
CCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCEEEEECHHHCCCCCCCCCH
TAIEIMKVSKIMVKVLKDTYKSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DSSTLEVVSKKIQQQLKDYVIK
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]