Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379236
Identifier: 148379236
GI number: 148379236
Start: 1367204
End: 1367950
Strand: Direct
Name: 148379236
Synonym: CBO1251
Alternate gene names: NA
Gene position: 1367204-1367950 (Clockwise)
Preceding gene: 148379235
Following gene: 148379237
Centisome position: 35.17
GC content: 26.51
Gene sequence:
>747_bases ATGAATATTAAAAAACTTTTTTTTATATTTACATTAGTAGTTATAGTTTTTGCTACAGCATGTACAAATAAAATTAAAGA AACTAATGTAAGAGATACAAATGAAAAGCCTAAAGAAGAAACAAAAATTATAGATTCTAATGGGGCAGAAAAAGCAAAAC TTAATTTAGAGTTTGGAGCAGGAAAATTAAATGTAGATGGTAATGAAGAAAAGCTTATGAAGGGTAAATTTATATATAGT AAAAAGGAGTGGAGACCTGAAATAAAATATGAAGTTAAAGATAAAGAAGGAGAAATCACAATTTCTCAACCTTCATTAAA TGGAGGAAATATATCTTTAAATAAAAAGGAATATAATGAATGGGATATAAATTTAAATGAAAAAATACCTATGGAAATAA AATTAAATCTAGGAGCAGGAGAATTTAAAGCAGATTTGAATAAGATAAACTTAAAAGAATTAAATGTTGAGATGGGAGTA GGAAAGCTGGACTTGGATATATCAGGTAATTATAAAAACAATATTAAAGTAGATATACAAGGTGGAGTTGGTGAAGCAAC TGTATACTTATCTAAATCTATGGGGGTTAAGATAAAAGCTGAAAAAGGGGTAGGTACAATTAATGCTAATGGATTTATAG TAGAGGATGGAAATATCTATAAAAATTCTCAATATGGAAAAAGTAAAAATAACATAGATGTTAATATTGAAGCTGGAGTG GGAGCTATTAATATAAAAGAAAAGTAA
Upstream 100 bases:
>100_bases ATACATGTTGGGCTATGTTAATTATTGACTATCTTATGAATATGATGATAAAATTTTTTATATAGTAAATATAAATACTG AATTTTAATGGGGGGATAAA
Downstream 100 bases:
>100_bases AAAAATATTTAAGCTAGGTAAATTATATATTTACTGTTAAGAAAAATAAATATAGATTAATATTTAATCAAATTTTATGA GATATAGTAATAAGGTCACT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIIDSNGAEKAKLNLEFGAGKLNVDGNEEKLMKGKFIYS KKEWRPEIKYEVKDKEGEITISQPSLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKLDLDISGNYKNNIKVDIQGGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK
Sequences:
>Translated_248_residues MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIIDSNGAEKAKLNLEFGAGKLNVDGNEEKLMKGKFIYS KKEWRPEIKYEVKDKEGEITISQPSLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKLDLDISGNYKNNIKVDIQGGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK >Mature_248_residues MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIIDSNGAEKAKLNLEFGAGKLNVDGNEEKLMKGKFIYS KKEWRPEIKYEVKDKEGEITISQPSLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKLDLDISGNYKNNIKVDIQGGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27555; Mature: 27555
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIIDSNGAEKAKLNLEFGA CCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHEEECCCCCCEEEEEEEECC GKLNVDGNEEKLMKGKFIYSKKEWRPEIKYEVKDKEGEITISQPSLNGGNISLNKKEYNE EEEECCCCHHHEEECEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECCCCCCE WDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGVGKLDLDISGNYKNNIKVDIQ EEEECCCCCCEEEEEECCCCHHCCCCCEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEE GGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV CCCCEEEEEEECCCCEEEEECCCCEEECCCEEEEECCCEEECCCCCCCCCCEEEEEECCC GAINIKEK EEEEEECC >Mature Secondary Structure MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIIDSNGAEKAKLNLEFGA CCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHEEECCCCCCEEEEEEEECC GKLNVDGNEEKLMKGKFIYSKKEWRPEIKYEVKDKEGEITISQPSLNGGNISLNKKEYNE EEEECCCCHHHEEECEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECCCCCCE WDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGVGKLDLDISGNYKNNIKVDIQ EEEECCCCCCEEEEEECCCCHHCCCCCEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEE GGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV CCCCEEEEEEECCCCEEEEECCCCEEECCCEEEEECCCEEECCCCCCCCCCEEEEEECCC GAINIKEK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA