Click here to switch to the map view.

The map label for this gene is 148379231

Identifier: 148379231

GI number: 148379231

Start: 1365562

End: 1365783

Strand: Direct

Name: 148379231

Synonym: CBO1248

Alternate gene names: NA

Gene position: 1365562-1365783 (Clockwise)

Preceding gene: 148379230

Following gene: 148379232

Centisome position: 35.13

GC content: 26.13

Gene sequence:

>222_bases
ATGGGAGGTATTAGATATATGGCTATAAAAAATAAATTGTTAGATATTAGATTAAGTATGGGTTACAAAACGCAAAAGGA
ATTTGCTGAGTTTCTAGGTATAAGACGTGTCCAATATAATAAGTATGAAAACAATAAAGAACAACCAGCCCTAGAAGCTC
TATATAAAATTAGTTTAAAGTTAAATATAAAAATGGAGAATATTATTTACTTAGATGAATAA

Upstream 100 bases:

>100_bases
GGTCATTTTTATTATAGCCAGATATAATAATTTTATTCTTTTTTAATATACATTTTTAAACATATAAAGGAAATAATATT
ATACCTTAGAATATTATGTA

Downstream 100 bases:

>100_bases
TATTCTTTTATTTTTTATAGTAATAGTTCAAAATAATATATTTTAGTTCAAAATAGGAAATTTTTATACCAAAGAAGTAT
ATAGTATTAGTAAAGAAGGG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MGGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE

Sequences:

>Translated_73_residues
MGGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE
>Mature_72_residues
GGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8705; Mature: 8574

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLK
CCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHEEEEE
LNIKMENIIYLDE
EEEEEEEEEEECC
>Mature Secondary Structure 
GGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLK
CCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHEEEEE
LNIKMENIIYLDE
EEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA