Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379206
Identifier: 148379206
GI number: 148379206
Start: 1343789
End: 1344604
Strand: Reverse
Name: 148379206
Synonym: CBO1223
Alternate gene names: NA
Gene position: 1344604-1343789 (Counterclockwise)
Preceding gene: 148379207
Following gene: 148379205
Centisome position: 34.59
GC content: 27.94
Gene sequence:
>816_bases ATGAAAAAAAATTTTTTCCCTTTAATATTTTTGTTAGTTTTATGTCTTTGCCCTATTTCATTAGCTCATGCTGAATCAGG AAGAATAACTTTAAACAAAGTAACCTCTTCTCCTGAAATAATAGAACCTGGTAGTAAATTTAAAATTAATTTTTCTATAA CTAATAATAAAGAAACTAATCTAAAGGATGTAGTTATAACCTTAGTTGGCTCAGAAGATAAAAAAGTCTTAACGGATTTT TCTCCTGTTGGAAGTACCAATGAAATCTATGTAGGTCATATAGATGGTGAAACTTCTAAGGATGCTACTATAGAGATGGC CTGTGATCCTAATTTAAAAGCTGGCAATTATAATATTTTAGTTAAAATAGGTTATAAATTATATGGAGAATATGTAGAAG AAACTAGAATAATAGGCTTAATCTTAGGAAATAAGCCTAATCTACTTATAACCTCTCTAGATGCCTCTAATAAGGATGGA GAAGGCAAAAAATTATCATTGAACTTTGTTAATAGTGGTAAATCCACTTTAAAAGATGTAATGGTAAATATTAAAGCTAA AGATAAGACCTTTACTAAATATTTTGGCACTATGGAATCAGAAGATGAAAATGAATTTAAACAAGATTTAAATTTATCTG GTGATATAAAAGGTACTGTAGAAATAAGCTTTAAAGACGAATTAAACAAGCCTTCTAAAGTTTCACAAGAATTCTCTATT AAAGGAAAGATTGACGACACTAATACTGTAAAAAAAGAAAAAAAGAGTTCTGGTATACTAGGTTTTTTTAAAGGCTTATT AGGAATAGGTGATTAA
Upstream 100 bases:
>100_bases TCAAGTTTGTGATTATGCAAATAAAATAATAAAAGTGGTAGACGGAAAAGTATTCAATAACTAATTACCCTATGTAAAAT TATTTAGGAGGTGCACAATA
Downstream 100 bases:
>100_bases TATGAAGCTTACTGACCTTGCAGAAATTATATGGAGAAACCTTTTAAAAAGAAAAGGAAGAACATTTTTAACTATGCTCG GAGTAATTATAGGTAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTDF SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD
Sequences:
>Translated_271_residues MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTDF SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD >Mature_271_residues MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTDF SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD
Specific function: Unknown
COG id: COG1361
COG function: function code M; S-layer domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29809; Mature: 29809
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETN CCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEEEECCCCCC LKDVVITLVGSEDKKVLTDFSPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNIL CEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEE VKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDGEGKKLSLNFVNSGKSTLKDV EEECHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH MVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI EEEEECCCCEEHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEE KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD EECCCCCHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETN CCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEEEECCCCCC LKDVVITLVGSEDKKVLTDFSPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNIL CEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEE VKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDGEGKKLSLNFVNSGKSTLKDV EEECHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH MVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI EEEEECCCCEEHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEE KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD EECCCCCHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA