Click here to switch to the map view.

The map label for this gene is xylP [H]

Identifier: 148379182

GI number: 148379182

Start: 1317815

End: 1318540

Strand: Direct

Name: xylP [H]

Synonym: CBO1199

Alternate gene names: 148379182

Gene position: 1317815-1318540 (Clockwise)

Preceding gene: 148379180

Following gene: 148379183

Centisome position: 33.9

GC content: 27.55

Gene sequence:

>726_bases
GTGAACATAGCAAATTATAAAGTTAATAATAATCCCAATAAAGAAATCATTAATTTTTCTGAGAAACTTGGATATGGATT
AGGAGATTTCGCATGTAATTTGGTTTGGAATTCACTTAGTATGTTTATATTATATTTCTATACTGATGTTATGGGAATGA
AGGCAGCGATAATAAGTACACTGATGTTAGTTGTTCGTATAATTGCAGGGTTTATGGATATTGCTTCAGGAATTGTAGTT
GATAAAACAAAAACAAAGTATGGTAAAAGGAATACTGCAATTTTGGGTTCTATTATTTTCATTTTAGGTTCATTATTTGC
TCTAATAGATTTAACAAGCGTTAAGTTAATTTATATTTCTATCATTGTAAAAGGAACTGGGAATGCGTTAATTTCTGCTA
CTGTTTTTGCTTTATTAGCAGATACAATTGAATATGGTGAATGGAAAACAAATGTTAGGACAGAAGGGCTAGTTTATAGT
GCAGGAAACTTTGGATTAAAAATTGGAATTGGATTGGGTACAGCAATTGTAGGATGGTTATTAGCATTTAGTAATTATAA
TGGATCATCTAAAATTCAAACAAATACAGCTATAAATGCTATTAACATTTTATTTATATGGTTACCAATGATTTTATCAG
GTGTACAAATTATTTTACTTAAATTTTATAAGTTAGATAAAATATACCCAAATATTATTAGCGATTTAGAAAATAGAAAG
ATATAG

Upstream 100 bases:

>100_bases
ACACTTACTGTTAACGTTAATATAGTATTTTAAAAATAAATTTAGTGGCTATCTTTGTGCAGAATAAAATGATTTATAAA
TCAAAGGAGGAGGAATATAG

Downstream 100 bases:

>100_bases
AAGGAGGAAGAATATGAAATTTATACAGTATAAAACTACTAAAAAAGATAAATTCTTAAAAAACGAAATTAATAATACTA
CAGATGAAAGACCAACATTA

Product: membrane protein

Products: Proton [Cytoplasm]; Glucuronides [Cytoplasm] [C]

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYS
AGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRK
I

Sequences:

>Translated_241_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYS
AGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRK
I
>Mature_241_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYS
AGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRK
I

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1787902, Length=183, Percent_Identity=30.0546448087432, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786466, Length=85, Percent_Identity=42.3529411764706, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI145693206, Length=158, Percent_Identity=32.9113924050633, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87082306, Length=89, Percent_Identity=31.4606741573034, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 26520; Mature: 26520

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCCEEECCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRIIAGFMDIASGIVVDKTKTKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYIS
HHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
IIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWL
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHH
LAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRK
HHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
I
C
>Mature Secondary Structure
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCCEEECCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRIIAGFMDIASGIVVDKTKTKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYIS
HHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
IIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWL
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHH
LAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRK
HHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; Glucuronides [Periplasm] [C]

Specific reaction: Proton [Periplasm] + Glucuronides [Periplasm] = Proton [Cytoplasm] + Glucuronides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]