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The map label for this gene is yhdW [H]

Identifier: 148379174

GI number: 148379174

Start: 1304526

End: 1306412

Strand: Direct

Name: yhdW [H]

Synonym: CBO1190

Alternate gene names: 148379174

Gene position: 1304526-1306412 (Clockwise)

Preceding gene: 148379173

Following gene: 148379175

Centisome position: 33.56

GC content: 30.63

Gene sequence:

>1887_bases
ATGACAACGAGAATGGAGACAAGGCATAGTAAACCCATATCCATATTAAAGATGATAAGAAAAAATTTCACCTATTTTAA
AAAGAGTTTTTTTATAAATATTGGATTTGAATCGATATACAAAGTGTTGACAAGCTTTATATTTCTCCCATTTATTACAA
TGGTGCTAAATTATTTTATGCATCTAAGAGGGATGAAGATGATGGCAAATAACCAAATATTAAGTTTTGTAGGAAGTATT
CCAGGAATTTTGACAATTTTAATTTTGGGAATTCTTAGCTTTCTTTTTATTTTTATAGAATATGCAGGGCTTATTGTAAT
ATCACAGGAAACATATTTTGATAAAAAGATTTCAGCAAAAGCAGCTTTTTTTACAGCAATGAAAAGTATTAGAGGTATTA
TGAAAGTAGGCTCTATTCCAATTATAATATATGTTCTATTTATTATTCCTTTTGTAGCTAGTTCAATGGGGTTGTCTTCA
AGTTTACTTCCGAAAATTGAAATACCAACCTTTATTATGGATGTAGTATACAAAACACCAAAATGGATAAGTTTATATGC
AATTGTATTTTTTATACTATTCTATTTTCTAATTAGATGGATTTTTTCATTGCACGTTGTAGTATTGGAAGGAAAGGATT
TCTCAAGTGCATTAAAGAGAAGTTCGCAGCTTGTAAAAGGATCTTTTCTTAAGATTTGGACTACTATGTTTTTGTGGAAC
TTAAGTATTTTTGCTATTGTAGCAGTAGTAGTGATTTTAGTGGGAATTGGTATGGTGCTTTTAAATGAAGTACTAAAAGG
AAATGTGAAACTATTTGTAACTATTCTTTCCTTTGTTACAACAATGGGTGGAATATTAGTCATGATAGCCACTTTATTTA
TTTCTCCACTTACTATTATGTTGATTACTCAATTGTATTATAGACAAGTAAAAATGAAAGATGGTGTAGAACCAATACCT
ATGATTACTACATCAACACCAAGCAAAATAAACTGGCAAAATTTATTTAATCGACATAAGAAAAAGTTAATAGCAGTTAG
TGTGCTAGGAATAATGATATTTACATGGCTTTCCTATGTTTATTTTATTACTTATGAATTTGATGCCAATAACAACTTGG
TTACTGTTACCGCTCACAGGGGAGATGCTGTTAATGCACCAGATAACACTATGAGTTCACTTTTAGGTGCTATTGCCAAC
AAAGCAGATTATAGTGAGTTAGACGTACAGGAAACAAAGGATGGAGTGGTAGTTTTAACCCACGATACAAATTTAAAGAA
CAGTACAGGGGTAAACAAAAATATTTGGGAATTGGTCTTTGATGAAGTAGAAAAATTAGATGTGGGAAGTCATTTTTCAC
CTAAGTTTGCTGGCGAGAAAATTCCAACCTTGGGCAGTATTATGAAAGCAGCCAATAAAAAGATAAAGCTAAATATAGAG
ATTAAACTGAATGGACATGATCAAAAGCTAGAAGAAAGAGTGGTAAAGCTTATAGAGGACAATAATTTTGTAGATCAATG
CGTAGTTACGTCCTTAGATTATAATGCTTTGCAAAAGGTAAAAAAATTAAATCCTAAGATCAAAGTGGGATATATTGTAT
TTGCAGGTATGGGAGATGTTACTGCATTGAATGTGGACTTCCTGAGTGTAGAAGAAGCCGTTGCAACGCCAGAATTTATT
GAGAAAGTGCATAAAACTAATAAAAGGATTCATGTTTGGACAATAAATGATCCCGAAAAAATGGAAAAGTTTATAGACTT
ACAAGTAGATAGTATTATTACAGATAACTCCAAAGAAGTAACAAGGTTAATTCAGGAGAAAAAAGATAAGCAGCTTAGAA
ATGAAATAGATTATATTTACAAAATTGTAGCATTATTTAATGATTAG

Upstream 100 bases:

>100_bases
GTTTTTTGCATGGGAATTGCAATGATCACATTATGTGTGTTAATTTTAGCAGCATTAATTGTAGCTAGATTAAAAAAGAA
AATGTAAAGGGGACAGATCA

Downstream 100 bases:

>100_bases
ATAAAGTTTTAAAACTTTTGAACTATTTGTTATATAAGAAAAAAAGGAGATAAGTGTTAATAAAAGTCGCGATGAACTTA
TTTAATTCTTAGAAAGAAGT

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MTTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTSFIFLPFITMVLNYFMHLRGMKMMANNQILSFVGSI
PGILTILILGILSFLFIFIEYAGLIVISQETYFDKKISAKAAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSS
SLLPKIEIPTFIMDVVYKTPKWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSSQLVKGSFLKIWTTMFLWN
LSIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTTMGGILVMIATLFISPLTIMLITQLYYRQVKMKDGVEPIP
MITTSTPSKINWQNLFNRHKKKLIAVSVLGIMIFTWLSYVYFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIAN
KADYSELDVQETKDGVVVLTHDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAGEKIPTLGSIMKAANKKIKLNIE
IKLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNALQKVKKLNPKIKVGYIVFAGMGDVTALNVDFLSVEEAVATPEFI
EKVHKTNKRIHVWTINDPEKMEKFIDLQVDSIITDNSKEVTRLIQEKKDKQLRNEIDYIYKIVALFND

Sequences:

>Translated_628_residues
MTTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTSFIFLPFITMVLNYFMHLRGMKMMANNQILSFVGSI
PGILTILILGILSFLFIFIEYAGLIVISQETYFDKKISAKAAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSS
SLLPKIEIPTFIMDVVYKTPKWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSSQLVKGSFLKIWTTMFLWN
LSIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTTMGGILVMIATLFISPLTIMLITQLYYRQVKMKDGVEPIP
MITTSTPSKINWQNLFNRHKKKLIAVSVLGIMIFTWLSYVYFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIAN
KADYSELDVQETKDGVVVLTHDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAGEKIPTLGSIMKAANKKIKLNIE
IKLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNALQKVKKLNPKIKVGYIVFAGMGDVTALNVDFLSVEEAVATPEFI
EKVHKTNKRIHVWTINDPEKMEKFIDLQVDSIITDNSKEVTRLIQEKKDKQLRNEIDYIYKIVALFND
>Mature_627_residues
TTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTSFIFLPFITMVLNYFMHLRGMKMMANNQILSFVGSIP
GILTILILGILSFLFIFIEYAGLIVISQETYFDKKISAKAAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSSS
LLPKIEIPTFIMDVVYKTPKWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSSQLVKGSFLKIWTTMFLWNL
SIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTTMGGILVMIATLFISPLTIMLITQLYYRQVKMKDGVEPIPM
ITTSTPSKINWQNLFNRHKKKLIAVSVLGIMIFTWLSYVYFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIANK
ADYSELDVQETKDGVVVLTHDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAGEKIPTLGSIMKAANKKIKLNIEI
KLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNALQKVKKLNPKIKVGYIVFAGMGDVTALNVDFLSVEEAVATPEFIE
KVHKTNKRIHVWTINDPEKMEKFIDLQVDSIITDNSKEVTRLIQEKKDKQLRNEIDYIYKIVALFND

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI146198640, Length=168, Percent_Identity=26.1904761904762, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7706617, Length=129, Percent_Identity=31.0077519379845, Blast_Score=73, Evalue=9e-13,
Organism=Homo sapiens, GI260763878, Length=158, Percent_Identity=34.1772151898734, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI260763876, Length=158, Percent_Identity=34.1772151898734, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI260763880, Length=158, Percent_Identity=34.1772151898734, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789858, Length=231, Percent_Identity=25.5411255411255, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17542344, Length=166, Percent_Identity=27.1084337349398, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 71429; Mature: 71298

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTSFIFLPFITMVLNYFM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
HLRGMKMMANNQILSFVGSIPGILTILILGILSFLFIFIEYAGLIVISQETYFDKKISAK
HHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHH
AAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSSSLLPKIEIPTFIMDVVYKTP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
KWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSSQLVKGSFLKIWTTMFLWN
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTTMGGILVMIATLFISPLTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITQLYYRQVKMKDGVEPIPMITTSTPSKINWQNLFNRHKKKLIAVSVLGIMIFTWLSYV
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIANKADYSELDVQETKDGVVVLT
EEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEE
HDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAGEKIPTLGSIMKAANKKIKLNIE
ECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE
IKLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNALQKVKKLNPKIKVGYIVFAGMGDV
EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCE
TALNVDFLSVEEAVATPEFIEKVHKTNKRIHVWTINDPEKMEKFIDLQVDSIITDNSKEV
EEEEEHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHH
TRLIQEKKDKQLRNEIDYIYKIVALFND
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTSFIFLPFITMVLNYFM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
HLRGMKMMANNQILSFVGSIPGILTILILGILSFLFIFIEYAGLIVISQETYFDKKISAK
HHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHH
AAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSSSLLPKIEIPTFIMDVVYKTP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
KWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSSQLVKGSFLKIWTTMFLWN
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTTMGGILVMIATLFISPLTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITQLYYRQVKMKDGVEPIPMITTSTPSKINWQNLFNRHKKKLIAVSVLGIMIFTWLSYV
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIANKADYSELDVQETKDGVVVLT
EEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEE
HDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAGEKIPTLGSIMKAANKKIKLNIE
ECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE
IKLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNALQKVKKLNPKIKVGYIVFAGMGDV
EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCE
TALNVDFLSVEEAVATPEFIEKVHKTNKRIHVWTINDPEKMEKFIDLQVDSIITDNSKEV
EEEEEHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHH
TRLIQEKKDKQLRNEIDYIYKIVALFND
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]