Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379168
Identifier: 148379168
GI number: 148379168
Start: 1297226
End: 1298026
Strand: Direct
Name: 148379168
Synonym: CBO1183
Alternate gene names: NA
Gene position: 1297226-1298026 (Clockwise)
Preceding gene: 148379167
Following gene: 148379169
Centisome position: 33.37
GC content: 28.71
Gene sequence:
>801_bases ATGAATTATAAATATAATAATCTTATTAACTATTTAAAGGATTTAGGTAGTGTAGCAGTAGCTTTTTCTGGAGGTGTAGA TAGTACCTTATTATTAAAAGCAGCAAAGGAAGCTTTAGGAGATAATGCTATTTCCATTACAGTAGTATCACCTTATATTC CAAAATGGGAAATAGAAGAAGCTAAAGAATTAGCAAATAACATAGGAATAAAATCATATTTTTTAGAAGTTCCAATGCTT GAAGAAATAAGATTTAATCCAGAAGATAGATGTTATATATGTAAAAAAGGCGTATTTAGCAAAATAAAAGAATTGGCAAA GGAAAAGGGCGTTAAATATATAGTAGATGGAACTAATTTAGATGATACAAAAGATTATAGACCAGGTATGAGAGCATTAA AAGAATTAGATGTAAAAAGTCCTCTTTTAGAAAACTCTATAAATAAAGAAGAAATAAGAACTTTATCTAAGGAGCTAGGT TTAGAAACTTGGAATAAACCTGCCTATGCCTGCCTTTTATCTAGAATTCCTTATAACCAAGAAATAAAAGAGGAAGATTT ATCTAGAATAGAAAAGGCAGAAGTATATATGATGGAGTTAGGATTTAGAGCAGTAAGGGTAAGAAGTCATGGGGATTTGG CTAGAATAGAAGTACCTAAAAAAGAAAGAGTGAAATTGTTCAATGAGGATATTCTAGATAAAGTATCAGAAAAATTTAAA AAATTAGGATTTAAATATGTTACTGTAGATACAGAAGGCTATAAGATGGGCAGTTTAAATACTGGAATAAATAAAAATTA G
Upstream 100 bases:
>100_bases TAGAAAAATTAAAGGAAATAGTAAAGTAATCTTTATAGAATATGGAAGTATTAGTCAGCATAACAATAGGACAAAAATAT AAGATGGGGGTGGTATAAAA
Downstream 100 bases:
>100_bases TTTAATATAGTTTAAAGAAAATAATTAGGAAAGTAAAATAAATTTAAAATTTTCCTAGTACATTAAAATTCACAATATAT GGGTATCAGATAAAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAISITVVSPYIPKWEIEEAKELANNIGIKSYFLEVPML EEIRFNPEDRCYICKKGVFSKIKELAKEKGVKYIVDGTNLDDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELG LETWNKPAYACLLSRIPYNQEIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKERVKLFNEDILDKVSEKFK KLGFKYVTVDTEGYKMGSLNTGINKN
Sequences:
>Translated_266_residues MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAISITVVSPYIPKWEIEEAKELANNIGIKSYFLEVPML EEIRFNPEDRCYICKKGVFSKIKELAKEKGVKYIVDGTNLDDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELG LETWNKPAYACLLSRIPYNQEIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKERVKLFNEDILDKVSEKFK KLGFKYVTVDTEGYKMGSLNTGINKN >Mature_266_residues MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAISITVVSPYIPKWEIEEAKELANNIGIKSYFLEVPML EEIRFNPEDRCYICKKGVFSKIKELAKEKGVKYIVDGTNLDDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELG LETWNKPAYACLLSRIPYNQEIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKERVKLFNEDILDKVSEKFK KLGFKYVTVDTEGYKMGSLNTGINKN
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30365; Mature: 30365
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAISITVVSPYIPKWEIEE CCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH AKELANNIGIKSYFLEVPMLEEIRFNPEDRCYICKKGVFSKIKELAKEKGVKYIVDGTNL HHHHHHHCCHHHHHCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEECCCCC DDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELGLETWNKPAYACLLSRIPYNQ CCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC EIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKERVKLFNEDILDKVSEKFK CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH KLGFKYVTVDTEGYKMGSLNTGINKN HCCCEEEEEECCCEEECCCCCCCCCC >Mature Secondary Structure MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAISITVVSPYIPKWEIEE CCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH AKELANNIGIKSYFLEVPMLEEIRFNPEDRCYICKKGVFSKIKELAKEKGVKYIVDGTNL HHHHHHHCCHHHHHCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEECCCCC DDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELGLETWNKPAYACLLSRIPYNQ CCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC EIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKERVKLFNEDILDKVSEKFK CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH KLGFKYVTVDTEGYKMGSLNTGINKN HCCCEEEEEECCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]